Protein–RNA interactions for Protein: P49459

UBE2A, Ubiquitin-conjugating enzyme E2 A, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2AP49459 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
UBE2AP49459 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
UBE2AP49459 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
UBE2AP49459 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
UBE2AP49459 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC12.91□□□□□ -0.34
UBE2AP49459 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC12.91□□□□□ -0.34
UBE2AP49459 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC12.91□□□□□ -0.34
UBE2AP49459 AC053503.5-201ENST00000601508 636 ntBASIC12.91□□□□□ -0.34
UBE2AP49459 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC12.91□□□□□ -0.34
UBE2AP49459 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
UBE2AP49459 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC12.91□□□□□ -0.34
UBE2AP49459 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
UBE2AP49459 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
UBE2AP49459 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
UBE2AP49459 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
UBE2AP49459 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
UBE2AP49459 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
UBE2AP49459 AP004607.4-201ENST00000530158 1459 ntBASIC12.91□□□□□ -0.34
UBE2AP49459 KRT87P-202ENST00000534226 1464 ntBASIC12.91□□□□□ -0.34
UBE2AP49459 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC12.91□□□□□ -0.34
UBE2AP49459 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
UBE2AP49459 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
UBE2AP49459 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
UBE2AP49459 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
UBE2AP49459 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
UBE2AP49459 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
UBE2AP49459 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
UBE2AP49459 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
UBE2AP49459 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC12.9□□□□□ -0.34
UBE2AP49459 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC12.9□□□□□ -0.34
UBE2AP49459 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
UBE2AP49459 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
UBE2AP49459 AK1-201ENST00000223836 736 ntTSL 3 BASIC12.9□□□□□ -0.34
UBE2AP49459 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
UBE2AP49459 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
UBE2AP49459 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
UBE2AP49459 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
UBE2AP49459 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC12.9□□□□□ -0.34
UBE2AP49459 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
UBE2AP49459 AC092667.1-201ENST00000434301 2586 ntBASIC12.9□□□□□ -0.34
UBE2AP49459 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
UBE2AP49459 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC12.9□□□□□ -0.34
UBE2AP49459 LINC02228-203ENST00000641970 1355 ntBASIC12.9□□□□□ -0.34
UBE2AP49459 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
UBE2AP49459 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
UBE2AP49459 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC12.9□□□□□ -0.35
UBE2AP49459 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.35
UBE2AP49459 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
UBE2AP49459 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
UBE2AP49459 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC12.89□□□□□ -0.35
UBE2AP49459 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
UBE2AP49459 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
UBE2AP49459 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
UBE2AP49459 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC12.89□□□□□ -0.35
UBE2AP49459 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC12.89□□□□□ -0.35
UBE2AP49459 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
UBE2AP49459 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
UBE2AP49459 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
UBE2AP49459 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC12.89□□□□□ -0.35
UBE2AP49459 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
UBE2AP49459 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
UBE2AP49459 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
UBE2AP49459 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
UBE2AP49459 MIR638-201ENST00000385237 100 ntBASIC12.89□□□□□ -0.35
UBE2AP49459 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC12.89□□□□□ -0.35
UBE2AP49459 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC12.89□□□□□ -0.35
UBE2AP49459 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
UBE2AP49459 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
UBE2AP49459 CPT2-209ENST00000636935 803 ntTSL 5 BASIC12.89□□□□□ -0.35
UBE2AP49459 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
UBE2AP49459 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
UBE2AP49459 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
UBE2AP49459 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
UBE2AP49459 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
UBE2AP49459 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
UBE2AP49459 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC12.89□□□□□ -0.35
UBE2AP49459 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
UBE2AP49459 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
UBE2AP49459 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
UBE2AP49459 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
UBE2AP49459 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
UBE2AP49459 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
UBE2AP49459 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
UBE2AP49459 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
UBE2AP49459 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC12.88□□□□□ -0.35
UBE2AP49459 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
UBE2AP49459 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
UBE2AP49459 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
UBE2AP49459 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
UBE2AP49459 POU5F1P4-201ENST00000413175 1085 ntBASIC12.88□□□□□ -0.35
UBE2AP49459 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
UBE2AP49459 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC12.88□□□□□ -0.35
UBE2AP49459 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC12.88□□□□□ -0.35
UBE2AP49459 TPRG1LP1-201ENST00000598702 760 ntBASIC12.88□□□□□ -0.35
UBE2AP49459 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC12.88□□□□□ -0.35
UBE2AP49459 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
UBE2AP49459 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC12.88□□□□□ -0.35
UBE2AP49459 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
UBE2AP49459 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
UBE2AP49459 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms