Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
SLC6A12P48065 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
SLC6A12P48065 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SLC6A12P48065 RARRES2P4-201ENST00000514074 484 ntBASIC19.75■□□□□ 0.75
SLC6A12P48065 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC19.75■□□□□ 0.75
SLC6A12P48065 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC19.75■□□□□ 0.75
SLC6A12P48065 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SLC6A12P48065 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SLC6A12P48065 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.75■□□□□ 0.75
SLC6A12P48065 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
SLC6A12P48065 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SLC6A12P48065 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.75■□□□□ 0.75
SLC6A12P48065 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SLC6A12P48065 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SLC6A12P48065 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SLC6A12P48065 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
SLC6A12P48065 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SLC6A12P48065 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SLC6A12P48065 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SLC6A12P48065 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SLC6A12P48065 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SLC6A12P48065 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC19.74■□□□□ 0.75
SLC6A12P48065 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SLC6A12P48065 AC231657.2-201ENST00000624556 255 ntBASIC19.74■□□□□ 0.75
SLC6A12P48065 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
SLC6A12P48065 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
SLC6A12P48065 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SLC6A12P48065 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SLC6A12P48065 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SLC6A12P48065 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SLC6A12P48065 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19.74■□□□□ 0.75
SLC6A12P48065 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
SLC6A12P48065 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC19.74■□□□□ 0.75
SLC6A12P48065 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SLC6A12P48065 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
SLC6A12P48065 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC19.73■□□□□ 0.75
SLC6A12P48065 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SLC6A12P48065 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SLC6A12P48065 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SLC6A12P48065 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
SLC6A12P48065 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SLC6A12P48065 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SLC6A12P48065 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SLC6A12P48065 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC19.73■□□□□ 0.75
SLC6A12P48065 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC19.73■□□□□ 0.75
SLC6A12P48065 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC19.73■□□□□ 0.75
SLC6A12P48065 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC19.73■□□□□ 0.75
SLC6A12P48065 PARP1-210ENST00000629232 477 ntTSL 5 BASIC19.73■□□□□ 0.75
SLC6A12P48065 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
SLC6A12P48065 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SLC6A12P48065 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.73■□□□□ 0.75
SLC6A12P48065 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
SLC6A12P48065 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.73■□□□□ 0.75
SLC6A12P48065 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SLC6A12P48065 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SLC6A12P48065 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.73■□□□□ 0.75
SLC6A12P48065 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC19.72■□□□□ 0.75
SLC6A12P48065 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SLC6A12P48065 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC19.72■□□□□ 0.75
SLC6A12P48065 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SLC6A12P48065 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SLC6A12P48065 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SLC6A12P48065 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
SLC6A12P48065 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SLC6A12P48065 APTR-203ENST00000430801 583 ntTSL 5 BASIC19.72■□□□□ 0.75
SLC6A12P48065 CYP2T1P-201ENST00000432607 1285 ntBASIC19.72■□□□□ 0.75
SLC6A12P48065 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC19.72■□□□□ 0.75
SLC6A12P48065 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC19.72■□□□□ 0.75
SLC6A12P48065 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
SLC6A12P48065 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC19.72■□□□□ 0.75
SLC6A12P48065 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
SLC6A12P48065 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SLC6A12P48065 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.72■□□□□ 0.75
SLC6A12P48065 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SLC6A12P48065 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SLC6A12P48065 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
SLC6A12P48065 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.71■□□□□ 0.75
SLC6A12P48065 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19.71■□□□□ 0.75
SLC6A12P48065 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
SLC6A12P48065 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SLC6A12P48065 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SLC6A12P48065 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SLC6A12P48065 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SLC6A12P48065 PGM5P4-201ENST00000421970 445 ntBASIC19.71■□□□□ 0.75
SLC6A12P48065 AC007322.1-201ENST00000426983 750 ntBASIC19.71■□□□□ 0.75
SLC6A12P48065 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.71■□□□□ 0.75
SLC6A12P48065 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC19.71■□□□□ 0.75
SLC6A12P48065 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC19.71■□□□□ 0.75
SLC6A12P48065 IKBKGP1-201ENST00000612193 1073 ntBASIC19.71■□□□□ 0.75
SLC6A12P48065 AL356652.1-201ENST00000615962 565 ntBASIC19.71■□□□□ 0.75
SLC6A12P48065 AC100791.3-201ENST00000617619 330 ntBASIC19.71■□□□□ 0.75
SLC6A12P48065 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC19.71■□□□□ 0.75
SLC6A12P48065 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
SLC6A12P48065 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
SLC6A12P48065 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC19.71■□□□□ 0.75
SLC6A12P48065 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SLC6A12P48065 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.7■□□□□ 0.74
SLC6A12P48065 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC19.7■□□□□ 0.74
SLC6A12P48065 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.7■□□□□ 0.74
SLC6A12P48065 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms