Protein–RNA interactions for Protein: P43588

RPN11, Ubiquitin carboxyl-terminal hydrolase RPN11, yeastyeast

Known RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPN11P43588 EDS1YBR033W 2760 nt2.69□□□□□ -1.98
RPN11P43588 ECM5YMR176W 4236 nt2.69□□□□□ -1.98
RPN11P43588 KIN82YCR091W 2163 nt2.69□□□□□ -1.98
RPN11P43588 YDR269CYDR269C 324 nt2.69□□□□□ -1.98
RPN11P43588 RPS17BYDR447C 411 nt2.69□□□□□ -1.98
RPN11P43588 YHR028W-AYHR028W-A 321 nt2.69□□□□□ -1.98
RPN11P43588 RPL37AYLR185W 267 nt2.69□□□□□ -1.98
RPN11P43588 RPL20AYMR242C 519 nt2.69□□□□□ -1.98
RPN11P43588 RPS7BYNL096C 573 nt2.69□□□□□ -1.98
RPN11P43588 ISU1YPL135W 498 nt2.69□□□□□ -1.98
RPN11P43588 YPR012WYPR012W 255 nt2.69□□□□□ -1.98
RPN11P43588 DSE4YNR067C 3354 nt2.69□□□□□ -1.98
RPN11P43588 TRM2YKR056W 1920 nt2.69□□□□□ -1.98
RPN11P43588 DIS3YOL021C 3006 nt2.69□□□□□ -1.98
RPN11P43588 SIR4YDR227W 4077 nt2.69□□□□□ -1.98
RPN11P43588 TRA1YHR099W 11235 nt2.69□□□□□ -1.98
RPN11P43588 SPO71YDR104C 3738 nt2.69□□□□□ -1.98
RPN11P43588 LEU3YLR451W 2661 nt2.68□□□□□ -1.98
RPN11P43588 GPI17YDR434W 1605 nt2.68□□□□□ -1.98
RPN11P43588 TSA2YDR453C 591 nt2.68□□□□□ -1.98
RPN11P43588 YMR31YFR049W 372 nt2.68□□□□□ -1.98
RPN11P43588 PEP8YJL053W 1140 nt2.68□□□□□ -1.98
RPN11P43588 YML084WYML084W 309 nt2.68□□□□□ -1.98
RPN11P43588 YOL057WYOL057W 2136 nt2.68□□□□□ -1.98
RPN11P43588 CDC20YGL116W 1833 nt2.68□□□□□ -1.98
RPN11P43588 YAT2YER024W 2772 nt2.67□□□□□ -1.98
RPN11P43588 APC2YLR127C 2562 nt2.67□□□□□ -1.98
RPN11P43588 RGR1YLR071C 3249 nt2.67□□□□□ -1.98
RPN11P43588 RNH70YGR276C 1662 nt2.67□□□□□ -1.98
RPN11P43588 YER079WYER079W 633 nt2.67□□□□□ -1.98
RPN11P43588 YER087C-AYER087C-A 552 nt2.67□□□□□ -1.98
RPN11P43588 IES5YER092W 378 nt2.67□□□□□ -1.98
RPN11P43588 YGL165CYGL165C 579 nt2.67□□□□□ -1.98
RPN11P43588 NFU1YKL040C 771 nt2.67□□□□□ -1.98
RPN11P43588 AIM32YML050W 936 nt2.67□□□□□ -1.98
RPN11P43588 YMR001C-AYMR001C-A 231 nt2.67□□□□□ -1.98
RPN11P43588 SIP18YMR175W 240 nt2.67□□□□□ -1.98
RPN11P43588 RPL25YOL127W 429 nt2.67□□□□□ -1.98
RPN11P43588 YBR032WYBR032W 303 nt2.67□□□□□ -1.98
RPN11P43588 ATP15YPL271W 189 nt2.67□□□□□ -1.98
RPN11P43588 RRP12YPL012W 3687 nt2.66□□□□□ -1.98
RPN11P43588 ROY1YMR258C 1662 nt2.66□□□□□ -1.98
RPN11P43588 YHL006W-AYHL006W-A 354 nt2.66□□□□□ -1.98
RPN11P43588 TPM2YIL138C 486 nt2.66□□□□□ -1.98
RPN11P43588 YOL159CYOL159C 516 nt2.66□□□□□ -1.98
RPN11P43588 TSC3YBR058C-A 243 nt2.66□□□□□ -1.98
RPN11P43588 SEN54YPL083C 1404 nt2.66□□□□□ -1.98
RPN11P43588 NDD1YOR372C 1665 nt2.66□□□□□ -1.98
RPN11P43588 IRC20YLR247C 4671 nt2.66□□□□□ -1.98
RPN11P43588 RRM3YHR031C 2172 nt2.66□□□□□ -1.98
RPN11P43588 YIL166CYIL166C 1629 nt2.65□□□□□ -1.98
RPN11P43588 MGM1YOR211C 2646 nt2.65□□□□□ -1.98
RPN11P43588 PUF4YGL014W 2667 nt2.65□□□□□ -1.99
RPN11P43588 SWF1YDR126W 1011 nt2.65□□□□□ -1.99
RPN11P43588 YKL111CYKL111C 336 nt2.65□□□□□ -1.99
RPN11P43588 TEN1YLR010C 483 nt2.65□□□□□ -1.99
RPN11P43588 URA10YMR271C 684 nt2.65□□□□□ -1.99
RPN11P43588 YOR248WYOR248W 303 nt2.65□□□□□ -1.99
RPN11P43588 YOR392WYOR392W 444 nt2.65□□□□□ -1.99
RPN11P43588 RLF2YPR018W 1821 nt2.65□□□□□ -1.99
RPN11P43588 DUG2YBR281C 2637 nt2.65□□□□□ -1.99
RPN11P43588 INO80YGL150C 4470 nt2.65□□□□□ -1.99
RPN11P43588 RTT107YHR154W 3213 nt2.64□□□□□ -1.99
RPN11P43588 HPA3YEL066W 540 nt2.64□□□□□ -1.99
RPN11P43588 RPC10YHR143W-A 213 nt2.64□□□□□ -1.99
RPN11P43588 TIM8YJR135W-A 264 nt2.64□□□□□ -1.99
RPN11P43588 NDT80YHR124W 1884 nt2.63□□□□□ -1.99
RPN11P43588 LAG1YHL003C 1236 nt2.63□□□□□ -1.99
RPN11P43588 YOR192C-CYOR192C-C 237 nt2.63□□□□□ -1.99
RPN11P43588 TRM7YBR061C 933 nt2.63□□□□□ -1.99
RPN11P43588 IRC8YJL051W 2469 nt2.63□□□□□ -1.99
RPN11P43588 YDR524W-CYDR524W-C 90 nt2.62□□□□□ -1.99
RPN11P43588 YJR140W-AYJR140W-A 150 nt2.62□□□□□ -1.99
RPN11P43588 HUG1YML058W-A 207 nt2.62□□□□□ -1.99
RPN11P43588 CTF4YPR135W 2784 nt2.62□□□□□ -1.99
RPN11P43588 TFC3YAL001C 3483 nt2.62□□□□□ -1.99
RPN11P43588 SET2YJL168C 2202 nt2.61□□□□□ -1.99
RPN11P43588 ADK1YDR226W 669 nt2.61□□□□□ -1.99
RPN11P43588 GLC7YER133W 939 nt2.61□□□□□ -1.99
RPN11P43588 HYR1YIR037W 492 nt2.61□□□□□ -1.99
RPN11P43588 YLR031WYLR031W 561 nt2.61□□□□□ -1.99
RPN11P43588 EGD1YPL037C 474 nt2.61□□□□□ -1.99
RPN11P43588 IRA2YOL081W 9240 nt2.61□□□□□ -1.99
RPN11P43588 COS111YBR203W 2775 nt2.61□□□□□ -1.99
RPN11P43588 SRO77YBL106C 3033 nt2.6□□□□□ -1.99
RPN11P43588 MDM32YOR147W 1869 nt2.6□□□□□ -1.99
RPN11P43588 DNL4YOR005C 2835 nt2.6□□□□□ -1.99
RPN11P43588 YEL018C-AYEL018C-A 534 nt2.6□□□□□ -1.99
RPN11P43588 YGR025WYGR025W 303 nt2.6□□□□□ -1.99
RPN11P43588 YHR138CYHR138C 345 nt2.6□□□□□ -1.99
RPN11P43588 CMS1YLR003C 876 nt2.6□□□□□ -1.99
RPN11P43588 COX7YMR256C 183 nt2.6□□□□□ -1.99
RPN11P43588 RPB11YOL005C 363 nt2.6□□□□□ -1.99
RPN11P43588 YBR285WYBR285W 435 nt2.6□□□□□ -1.99
RPN11P43588 PES4YFR023W 1836 nt2.6□□□□□ -1.99
RPN11P43588 FRE2YKL220C 2136 nt2.59□□□□□ -1.99
RPN11P43588 YDR194W-AYDR194W-A 153 nt2.59□□□□□ -1.99
RPN11P43588 YIL058WYIL058W 285 nt2.59□□□□□ -1.99
RPN11P43588 YAL026C-AYAL026C-A 438 nt2.59□□□□□ -1.99
RPN11P43588 YAL042C-AYAL042C-A 378 nt2.59□□□□□ -1.99
Retrieved 100 of 7,029 protein–RNA pairs in 69.6 ms