Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
COL15A1P39059 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
COL15A1P39059 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
COL15A1P39059 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC26.07■■□□□ 1.76
COL15A1P39059 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
COL15A1P39059 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC26.07■■□□□ 1.76
COL15A1P39059 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC26.07■■□□□ 1.76
COL15A1P39059 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC26.07■■□□□ 1.76
COL15A1P39059 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC26.07■■□□□ 1.76
COL15A1P39059 AC120498.8-201ENST00000614275 531 ntBASIC26.07■■□□□ 1.76
COL15A1P39059 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC26.06■■□□□ 1.76
COL15A1P39059 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC26.06■■□□□ 1.76
COL15A1P39059 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC26.06■■□□□ 1.76
COL15A1P39059 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC26.06■■□□□ 1.76
COL15A1P39059 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
COL15A1P39059 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
COL15A1P39059 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC26.06■■□□□ 1.76
COL15A1P39059 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC26.06■■□□□ 1.76
COL15A1P39059 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
COL15A1P39059 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC26.06■■□□□ 1.76
COL15A1P39059 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC26.06■■□□□ 1.76
COL15A1P39059 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC26.06■■□□□ 1.76
COL15A1P39059 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC26.06■■□□□ 1.76
COL15A1P39059 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC26.06■■□□□ 1.76
COL15A1P39059 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC26.06■■□□□ 1.76
COL15A1P39059 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
COL15A1P39059 MYB-221ENST00000527615 2381 ntTSL 5 BASIC26.05■■□□□ 1.76
COL15A1P39059 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
COL15A1P39059 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC26.05■■□□□ 1.76
COL15A1P39059 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
COL15A1P39059 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC26.05■■□□□ 1.76
COL15A1P39059 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC26.05■■□□□ 1.76
COL15A1P39059 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC26.05■■□□□ 1.76
COL15A1P39059 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC26.05■■□□□ 1.76
COL15A1P39059 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC26.05■■□□□ 1.76
COL15A1P39059 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC26.05■■□□□ 1.76
COL15A1P39059 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC26.05■■□□□ 1.76
COL15A1P39059 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC26.05■■□□□ 1.76
COL15A1P39059 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
COL15A1P39059 AC006557.6-201ENST00000623071 864 ntBASIC26.05■■□□□ 1.76
COL15A1P39059 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC26.04■■□□□ 1.76
COL15A1P39059 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
COL15A1P39059 MOK-233ENST00000524214 1539 ntTSL 2 BASIC26.04■■□□□ 1.76
COL15A1P39059 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
COL15A1P39059 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
COL15A1P39059 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
COL15A1P39059 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
COL15A1P39059 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
COL15A1P39059 KRASP1-201ENST00000407852 552 ntBASIC26.04■■□□□ 1.76
COL15A1P39059 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC26.04■■□□□ 1.76
COL15A1P39059 PGM5P4-201ENST00000421970 445 ntBASIC26.04■■□□□ 1.76
COL15A1P39059 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC26.04■■□□□ 1.76
COL15A1P39059 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
COL15A1P39059 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
COL15A1P39059 DHDH-203ENST00000522614 776 ntTSL 5 BASIC26.04■■□□□ 1.76
COL15A1P39059 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
COL15A1P39059 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
COL15A1P39059 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC26.04■■□□□ 1.76
COL15A1P39059 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
COL15A1P39059 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
COL15A1P39059 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
COL15A1P39059 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
COL15A1P39059 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC26.03■■□□□ 1.76
COL15A1P39059 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC26.03■■□□□ 1.76
COL15A1P39059 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
COL15A1P39059 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC26.03■■□□□ 1.76
COL15A1P39059 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC26.03■■□□□ 1.76
COL15A1P39059 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
COL15A1P39059 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
COL15A1P39059 MIR1224-201ENST00000408193 85 ntBASIC26.03■■□□□ 1.76
COL15A1P39059 BRWD1-AS2-201ENST00000603064 1028 ntBASIC26.03■■□□□ 1.76
COL15A1P39059 AL356652.1-201ENST00000615962 565 ntBASIC26.03■■□□□ 1.76
COL15A1P39059 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC26.03■■□□□ 1.76
COL15A1P39059 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
COL15A1P39059 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC26.03■■□□□ 1.76
COL15A1P39059 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC26.02■■□□□ 1.76
COL15A1P39059 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
COL15A1P39059 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC26.02■■□□□ 1.76
COL15A1P39059 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC26.02■■□□□ 1.76
COL15A1P39059 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
COL15A1P39059 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC26.02■■□□□ 1.76
COL15A1P39059 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
COL15A1P39059 AC110285.5-201ENST00000611501 352 ntBASIC26.02■■□□□ 1.76
COL15A1P39059 AC113410.3-201ENST00000623366 203 ntBASIC26.02■■□□□ 1.76
COL15A1P39059 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC26.02■■□□□ 1.76
COL15A1P39059 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
COL15A1P39059 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC26.02■■□□□ 1.76
COL15A1P39059 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC26.02■■□□□ 1.76
COL15A1P39059 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC26.02■■□□□ 1.76
COL15A1P39059 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC26.02■■□□□ 1.76
COL15A1P39059 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
COL15A1P39059 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC26.01■■□□□ 1.75
COL15A1P39059 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC26.01■■□□□ 1.75
COL15A1P39059 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC26.01■■□□□ 1.75
COL15A1P39059 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC26.01■■□□□ 1.75
COL15A1P39059 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC26.01■■□□□ 1.75
COL15A1P39059 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC26.01■■□□□ 1.75
COL15A1P39059 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
COL15A1P39059 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
COL15A1P39059 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC26.01■■□□□ 1.75
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms