Protein–RNA interactions for Protein: P38319

TDP1, Tyrosyl-DNA phosphodiesterase 1, yeastyeast

Predictions only

Length 544 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TDP1P38319 SPO14YKR031C 5052 nt3.01□□□□□ -1.93
TDP1P38319 SMC2YFR031C 3513 nt3□□□□□ -1.93
TDP1P38319 KAP104YBR017C 2757 nt3□□□□□ -1.93
TDP1P38319 YDR344CYDR344C 444 nt3□□□□□ -1.93
TDP1P38319 PAU10YDR542W 363 nt3□□□□□ -1.93
TDP1P38319 PAU11YGL261C 363 nt3□□□□□ -1.93
TDP1P38319 Q0143Q0143 153 nt3□□□□□ -1.93
TDP1P38319 YIL066W-AYIL066W-A 444 nt3□□□□□ -1.93
TDP1P38319 PAM16YJL104W 450 nt3□□□□□ -1.93
TDP1P38319 YLR154C-HYLR154C-H 132 nt3□□□□□ -1.93
TDP1P38319 YLR156C-AYLR156C-A 132 nt3□□□□□ -1.93
TDP1P38319 YLR157C-CYLR157C-C 132 nt3□□□□□ -1.93
TDP1P38319 YLR159C-AYLR159C-A 132 nt3□□□□□ -1.93
TDP1P38319 TMA10YLR327C 261 nt3□□□□□ -1.93
TDP1P38319 PAU4YLR461W 363 nt3□□□□□ -1.93
TDP1P38319 YPR014CYPR014C 330 nt3□□□□□ -1.93
TDP1P38319 RIX1YHR197W 2292 nt3□□□□□ -1.93
TDP1P38319 EPL1YFL024C 2499 nt3□□□□□ -1.93
TDP1P38319 NMA111YNL123W 2994 nt3□□□□□ -1.93
TDP1P38319 RKM1YPL208W 1752 nt3□□□□□ -1.93
TDP1P38319 YTA7YGR270W 4140 nt3□□□□□ -1.93
TDP1P38319 PCF11YDR228C 1881 nt2.99□□□□□ -1.93
TDP1P38319 YGR151CYGR151C 336 nt2.99□□□□□ -1.93
TDP1P38319 tQ(UUG)BtQ(UUG)B 72 nt2.99□□□□□ -1.93
TDP1P38319 RPS22BYLR367W 393 nt2.99□□□□□ -1.93
TDP1P38319 VHR2YER064C 1518 nt2.98□□□□□ -1.93
TDP1P38319 TFC1YBR123C 1950 nt2.98□□□□□ -1.93
TDP1P38319 YDL211CYDL211C 1119 nt2.98□□□□□ -1.93
TDP1P38319 TIF35YDR429C 825 nt2.98□□□□□ -1.93
TDP1P38319 YGL041CYGL041C 204 nt2.98□□□□□ -1.93
TDP1P38319 RPL26AYLR344W 384 nt2.98□□□□□ -1.93
TDP1P38319 ABF2YMR072W 552 nt2.98□□□□□ -1.93
TDP1P38319 BOI1YBL085W 2943 nt2.97□□□□□ -1.93
TDP1P38319 UBP14YBR058C 2346 nt2.97□□□□□ -1.93
TDP1P38319 ARP7YPR034W 1434 nt2.97□□□□□ -1.93
TDP1P38319 YRB1YDR002W 606 nt2.97□□□□□ -1.93
TDP1P38319 RPL8BYLL045C 771 nt2.97□□□□□ -1.93
TDP1P38319 TAR1YLR154W-C 375 nt2.97□□□□□ -1.93
TDP1P38319 snR191snR191 274 nt2.97□□□□□ -1.93
TDP1P38319 snR42snR42 351 nt2.97□□□□□ -1.93
TDP1P38319 FLO5YHR211W 3228 nt2.97□□□□□ -1.93
TDP1P38319 YHR078WYHR078W 1659 nt2.97□□□□□ -1.93
TDP1P38319 VAS1YGR094W 3315 nt2.96□□□□□ -1.93
TDP1P38319 NMD2YHR077C 3270 nt2.96□□□□□ -1.94
TDP1P38319 tK(UUU)DtK(UUU)D 73 nt2.96□□□□□ -1.94
TDP1P38319 tK(UUU)G1tK(UUU)G1 73 nt2.96□□□□□ -1.94
TDP1P38319 tK(UUU)G2tK(UUU)G2 73 nt2.96□□□□□ -1.94
TDP1P38319 tK(UUU)KtK(UUU)K 73 nt2.96□□□□□ -1.94
TDP1P38319 tK(UUU)LtK(UUU)L 73 nt2.96□□□□□ -1.94
TDP1P38319 tK(UUU)OtK(UUU)O 73 nt2.96□□□□□ -1.94
TDP1P38319 tK(UUU)PtK(UUU)P 73 nt2.96□□□□□ -1.94
TDP1P38319 DAD3YBR233W-A 285 nt2.96□□□□□ -1.94
TDP1P38319 snR49snR49 165 nt2.96□□□□□ -1.94
TDP1P38319 AKR1YDR264C 2295 nt2.96□□□□□ -1.94
TDP1P38319 DRS2YAL026C 4068 nt2.95□□□□□ -1.94
TDP1P38319 OSW7YFR039C 1533 nt2.95□□□□□ -1.94
TDP1P38319 DUF1YOL087C 3351 nt2.95□□□□□ -1.94
TDP1P38319 YDL007C-AYDL007C-A 258 nt2.95□□□□□ -1.94
TDP1P38319 APC11YDL008W 498 nt2.95□□□□□ -1.94
TDP1P38319 ALG13YGL047W 609 nt2.95□□□□□ -1.94
TDP1P38319 SDH2YLL041C 801 nt2.95□□□□□ -1.94
TDP1P38319 STE23YLR389C 3084 nt2.94□□□□□ -1.94
TDP1P38319 TRZ1YKR079C 2517 nt2.94□□□□□ -1.94
TDP1P38319 CHO2YGR157W 2610 nt2.94□□□□□ -1.94
TDP1P38319 COX1Q0045 1605 nt2.94□□□□□ -1.94
TDP1P38319 MCD1YDL003W 1701 nt2.94□□□□□ -1.94
TDP1P38319 SNF12YNR023W 1701 nt2.94□□□□□ -1.94
TDP1P38319 PMR1YGL167C 2853 nt2.94□□□□□ -1.94
TDP1P38319 RPL35AYDL191W 363 nt2.94□□□□□ -1.94
TDP1P38319 tT(UGU)Q1tT(UGU)Q1 76 nt2.94□□□□□ -1.94
TDP1P38319 YOR050CYOR050C 348 nt2.94□□□□□ -1.94
TDP1P38319 YOR170WYOR170W 306 nt2.94□□□□□ -1.94
TDP1P38319 PRK1YIL095W 2433 nt2.93□□□□□ -1.94
TDP1P38319 FLO1YAR050W 4614 nt2.93□□□□□ -1.94
TDP1P38319 ADK1YDR226W 669 nt2.93□□□□□ -1.94
TDP1P38319 YDR250CYDR250C 276 nt2.93□□□□□ -1.94
TDP1P38319 YEL020C-BYEL020C-B 198 nt2.93□□□□□ -1.94
TDP1P38319 RPA34YJL148W 702 nt2.93□□□□□ -1.94
TDP1P38319 ISU1YPL135W 498 nt2.93□□□□□ -1.94
TDP1P38319 ATG13YPR185W 2217 nt2.93□□□□□ -1.94
TDP1P38319 RIF1YBR275C 5751 nt2.92□□□□□ -1.94
TDP1P38319 ITC1YGL133W 3795 nt2.92□□□□□ -1.94
TDP1P38319 HTL1YCR020W-B 237 nt2.92□□□□□ -1.94
TDP1P38319 YDL011CYDL011C 324 nt2.92□□□□□ -1.94
TDP1P38319 YDL062WYDL062W 426 nt2.92□□□□□ -1.94
TDP1P38319 DAD4YDR320C-A 219 nt2.92□□□□□ -1.94
TDP1P38319 TSA2YDR453C 591 nt2.92□□□□□ -1.94
TDP1P38319 TIM8YJR135W-A 264 nt2.92□□□□□ -1.94
TDP1P38319 IES4YOR189W 351 nt2.92□□□□□ -1.94
TDP1P38319 PDC2YDR081C 2778 nt2.92□□□□□ -1.94
TDP1P38319 YAT2YER024W 2772 nt2.92□□□□□ -1.94
TDP1P38319 STE6YKL209C 3873 nt2.92□□□□□ -1.94
TDP1P38319 CWC22YGR278W 1734 nt2.91□□□□□ -1.94
TDP1P38319 YFH1YDL120W 525 nt2.91□□□□□ -1.94
TDP1P38319 GPI14YJR013W 1212 nt2.91□□□□□ -1.94
TDP1P38319 YAL059C-AYAL059C-A 423 nt2.91□□□□□ -1.94
TDP1P38319 YOL155W-AYOL155W-A 135 nt2.91□□□□□ -1.94
TDP1P38319 YOR011W-AYOR011W-A 207 nt2.91□□□□□ -1.94
TDP1P38319 YOR073W-AYOR073W-A 234 nt2.91□□□□□ -1.94
TDP1P38319 HEH2YDR458C 1992 nt2.91□□□□□ -1.94
Retrieved 100 of 7,029 protein–RNA pairs in 40.3 ms