Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SNCAP37840 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC16.75■□□□□ 0.27
SNCAP37840 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SNCAP37840 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
SNCAP37840 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SNCAP37840 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC16.74■□□□□ 0.27
SNCAP37840 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SNCAP37840 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
SNCAP37840 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
SNCAP37840 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC16.74■□□□□ 0.27
SNCAP37840 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SNCAP37840 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC16.74■□□□□ 0.27
SNCAP37840 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SNCAP37840 AC126544.1-201ENST00000580842 1059 ntBASIC16.74■□□□□ 0.27
SNCAP37840 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC16.74■□□□□ 0.27
SNCAP37840 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SNCAP37840 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC16.74■□□□□ 0.27
SNCAP37840 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC16.74■□□□□ 0.27
SNCAP37840 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
SNCAP37840 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
SNCAP37840 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SNCAP37840 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SNCAP37840 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SNCAP37840 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC16.73■□□□□ 0.27
SNCAP37840 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SNCAP37840 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC16.73■□□□□ 0.27
SNCAP37840 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC16.73■□□□□ 0.27
SNCAP37840 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SNCAP37840 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SNCAP37840 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
SNCAP37840 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC16.73■□□□□ 0.27
SNCAP37840 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
SNCAP37840 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SNCAP37840 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC16.73■□□□□ 0.27
SNCAP37840 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
SNCAP37840 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC16.73■□□□□ 0.27
SNCAP37840 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
SNCAP37840 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC16.73■□□□□ 0.27
SNCAP37840 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SNCAP37840 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC16.73■□□□□ 0.27
SNCAP37840 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SNCAP37840 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SNCAP37840 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SNCAP37840 AC112907.3-201ENST00000577781 2400 ntBASIC16.72■□□□□ 0.27
SNCAP37840 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC16.72■□□□□ 0.27
SNCAP37840 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SNCAP37840 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SNCAP37840 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SNCAP37840 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SNCAP37840 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC16.72■□□□□ 0.27
SNCAP37840 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SNCAP37840 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SNCAP37840 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
SNCAP37840 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
SNCAP37840 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SNCAP37840 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SNCAP37840 SMUG1P1-201ENST00000590640 811 ntBASIC16.72■□□□□ 0.27
SNCAP37840 AC233992.3-201ENST00000607491 485 ntBASIC16.72■□□□□ 0.27
SNCAP37840 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC16.72■□□□□ 0.27
SNCAP37840 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
SNCAP37840 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SNCAP37840 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SNCAP37840 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC16.72■□□□□ 0.27
SNCAP37840 LETM1P2-201ENST00000597330 2178 ntBASIC16.72■□□□□ 0.27
SNCAP37840 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SNCAP37840 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SNCAP37840 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SNCAP37840 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC16.72■□□□□ 0.27
SNCAP37840 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC16.72■□□□□ 0.27
SNCAP37840 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
SNCAP37840 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SNCAP37840 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
SNCAP37840 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SNCAP37840 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.27
SNCAP37840 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC16.71■□□□□ 0.27
SNCAP37840 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SNCAP37840 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SNCAP37840 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SNCAP37840 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SNCAP37840 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SNCAP37840 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SNCAP37840 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SNCAP37840 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SNCAP37840 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SNCAP37840 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SNCAP37840 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SNCAP37840 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
SNCAP37840 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
SNCAP37840 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SNCAP37840 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
SNCAP37840 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SNCAP37840 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SNCAP37840 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC16.71■□□□□ 0.27
SNCAP37840 MIR4767-201ENST00000582827 78 ntBASIC16.71■□□□□ 0.27
SNCAP37840 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC16.71■□□□□ 0.27
SNCAP37840 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SNCAP37840 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SNCAP37840 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SNCAP37840 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SNCAP37840 NARF-205ENST00000412079 1760 ntTSL 5 BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms