Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
SLC6A4P31645 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC21.01■□□□□ 0.95
SLC6A4P31645 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SLC6A4P31645 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SLC6A4P31645 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC21.01■□□□□ 0.95
SLC6A4P31645 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
SLC6A4P31645 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21■□□□□ 0.95
SLC6A4P31645 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
SLC6A4P31645 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC21■□□□□ 0.95
SLC6A4P31645 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
SLC6A4P31645 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC21■□□□□ 0.95
SLC6A4P31645 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
SLC6A4P31645 HES2-205ENST00000487437 968 ntTSL 3 BASIC21■□□□□ 0.95
SLC6A4P31645 C2orf69P4-201ENST00000565394 541 ntBASIC21■□□□□ 0.95
SLC6A4P31645 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC21■□□□□ 0.95
SLC6A4P31645 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC21■□□□□ 0.95
SLC6A4P31645 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SLC6A4P31645 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SLC6A4P31645 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
SLC6A4P31645 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SLC6A4P31645 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SLC6A4P31645 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC21■□□□□ 0.95
SLC6A4P31645 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SLC6A4P31645 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
SLC6A4P31645 AL137060.1-201ENST00000618151 2648 ntBASIC20.99■□□□□ 0.95
SLC6A4P31645 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SLC6A4P31645 KRT8P36-201ENST00000489121 1440 ntBASIC20.99■□□□□ 0.95
SLC6A4P31645 MFF-205ENST00000354503 1085 ntTSL 2 BASIC20.99■□□□□ 0.95
SLC6A4P31645 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
SLC6A4P31645 STK25-205ENST00000405883 1904 ntTSL 2 BASIC20.99■□□□□ 0.95
SLC6A4P31645 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SLC6A4P31645 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SLC6A4P31645 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SLC6A4P31645 AL121603.2-201ENST00000557373 2117 ntBASIC20.99■□□□□ 0.95
SLC6A4P31645 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC20.99■□□□□ 0.95
SLC6A4P31645 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC20.99■□□□□ 0.95
SLC6A4P31645 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.99■□□□□ 0.95
SLC6A4P31645 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
SLC6A4P31645 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SLC6A4P31645 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
SLC6A4P31645 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
SLC6A4P31645 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.98■□□□□ 0.95
SLC6A4P31645 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SLC6A4P31645 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.98■□□□□ 0.95
SLC6A4P31645 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.98■□□□□ 0.95
SLC6A4P31645 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SLC6A4P31645 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
SLC6A4P31645 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SLC6A4P31645 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
SLC6A4P31645 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC20.98■□□□□ 0.95
SLC6A4P31645 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC20.98■□□□□ 0.95
SLC6A4P31645 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC20.98■□□□□ 0.95
SLC6A4P31645 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC20.98■□□□□ 0.95
SLC6A4P31645 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
SLC6A4P31645 AC006128.1-201ENST00000624704 1661 ntBASIC20.98■□□□□ 0.95
SLC6A4P31645 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SLC6A4P31645 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SLC6A4P31645 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SLC6A4P31645 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SLC6A4P31645 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SLC6A4P31645 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
SLC6A4P31645 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SLC6A4P31645 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SLC6A4P31645 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SLC6A4P31645 GAS7-202ENST00000396115 929 ntTSL 5 BASIC20.97■□□□□ 0.95
SLC6A4P31645 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC20.97■□□□□ 0.95
SLC6A4P31645 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC20.97■□□□□ 0.95
SLC6A4P31645 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC20.97■□□□□ 0.95
SLC6A4P31645 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC20.97■□□□□ 0.95
SLC6A4P31645 HLA-B-256ENST00000639848 1089 ntBASIC20.97■□□□□ 0.95
SLC6A4P31645 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SLC6A4P31645 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.97■□□□□ 0.95
SLC6A4P31645 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
SLC6A4P31645 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SLC6A4P31645 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SLC6A4P31645 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SLC6A4P31645 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.96■□□□□ 0.95
SLC6A4P31645 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SLC6A4P31645 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SLC6A4P31645 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
SLC6A4P31645 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC20.96■□□□□ 0.95
SLC6A4P31645 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC20.96■□□□□ 0.95
SLC6A4P31645 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SLC6A4P31645 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC20.96■□□□□ 0.95
SLC6A4P31645 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC20.96■□□□□ 0.95
SLC6A4P31645 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC20.96■□□□□ 0.95
SLC6A4P31645 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
SLC6A4P31645 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC20.96■□□□□ 0.95
SLC6A4P31645 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC20.96■□□□□ 0.95
SLC6A4P31645 AC060766.5-201ENST00000590539 871 ntBASIC20.96■□□□□ 0.95
SLC6A4P31645 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
SLC6A4P31645 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
SLC6A4P31645 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SLC6A4P31645 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SLC6A4P31645 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
SLC6A4P31645 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SLC6A4P31645 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.95■□□□□ 0.95
SLC6A4P31645 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.95■□□□□ 0.94
SLC6A4P31645 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
SLC6A4P31645 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms