Protein–RNA interactions for Protein: P31025

LCN1, Lipocalin-1, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1P31025 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
LCN1P31025 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
LCN1P31025 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
LCN1P31025 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC18.88■□□□□ 0.61
LCN1P31025 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LCN1P31025 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
LCN1P31025 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LCN1P31025 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
LCN1P31025 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
LCN1P31025 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
LCN1P31025 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LCN1P31025 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
LCN1P31025 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LCN1P31025 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
LCN1P31025 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
LCN1P31025 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
LCN1P31025 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
LCN1P31025 AC068338.2-201ENST00000563278 1430 ntBASIC18.87■□□□□ 0.61
LCN1P31025 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC18.87■□□□□ 0.61
LCN1P31025 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
LCN1P31025 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
LCN1P31025 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LCN1P31025 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC18.86■□□□□ 0.61
LCN1P31025 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC18.86■□□□□ 0.61
LCN1P31025 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
LCN1P31025 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC18.86■□□□□ 0.61
LCN1P31025 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC18.86■□□□□ 0.61
LCN1P31025 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
LCN1P31025 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
LCN1P31025 AC007225.1-201ENST00000566331 1836 ntBASIC18.86■□□□□ 0.61
LCN1P31025 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LCN1P31025 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
LCN1P31025 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
LCN1P31025 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC18.86■□□□□ 0.61
LCN1P31025 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC18.86■□□□□ 0.61
LCN1P31025 PLLP-204ENST00000569059 665 ntTSL 3 BASIC18.86■□□□□ 0.61
LCN1P31025 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC18.86■□□□□ 0.61
LCN1P31025 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC18.86■□□□□ 0.61
LCN1P31025 AC069236.1-201ENST00000604339 616 ntBASIC18.86■□□□□ 0.61
LCN1P31025 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC18.86■□□□□ 0.61
LCN1P31025 MIR2861-201ENST00000636310 90 ntBASIC18.86■□□□□ 0.61
LCN1P31025 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.86■□□□□ 0.61
LCN1P31025 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
LCN1P31025 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
LCN1P31025 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LCN1P31025 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
LCN1P31025 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
LCN1P31025 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC18.85■□□□□ 0.61
LCN1P31025 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC18.85■□□□□ 0.61
LCN1P31025 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LCN1P31025 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC18.85■□□□□ 0.61
LCN1P31025 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LCN1P31025 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC18.85■□□□□ 0.61
LCN1P31025 VMO1-204ENST00000441199 741 ntTSL 2 BASIC18.85■□□□□ 0.61
LCN1P31025 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC18.85■□□□□ 0.61
LCN1P31025 RARRES2P4-201ENST00000514074 484 ntBASIC18.85■□□□□ 0.61
LCN1P31025 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC18.85■□□□□ 0.61
LCN1P31025 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC18.85■□□□□ 0.61
LCN1P31025 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
LCN1P31025 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LCN1P31025 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
LCN1P31025 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
LCN1P31025 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
LCN1P31025 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC18.84■□□□□ 0.61
LCN1P31025 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
LCN1P31025 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
LCN1P31025 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
LCN1P31025 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC18.84■□□□□ 0.61
LCN1P31025 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
LCN1P31025 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC18.84■□□□□ 0.61
LCN1P31025 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC18.84■□□□□ 0.61
LCN1P31025 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LCN1P31025 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
LCN1P31025 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC18.84■□□□□ 0.61
LCN1P31025 AC080038.1-201ENST00000611274 1154 ntBASIC18.84■□□□□ 0.61
LCN1P31025 AC008694.1-202ENST00000636953 945 ntBASIC18.84■□□□□ 0.61
LCN1P31025 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.84■□□□□ 0.61
LCN1P31025 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LCN1P31025 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.84■□□□□ 0.61
LCN1P31025 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.84■□□□□ 0.61
LCN1P31025 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
LCN1P31025 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LCN1P31025 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LCN1P31025 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
LCN1P31025 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LCN1P31025 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
LCN1P31025 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC18.84■□□□□ 0.61
LCN1P31025 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC18.84■□□□□ 0.61
LCN1P31025 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
LCN1P31025 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
LCN1P31025 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
LCN1P31025 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
LCN1P31025 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
LCN1P31025 APTR-203ENST00000430801 583 ntTSL 5 BASIC18.83■□□□□ 0.6
LCN1P31025 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC18.83■□□□□ 0.6
LCN1P31025 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
LCN1P31025 OR10C1-204ENST00000622521 1039 ntBASIC18.83■□□□□ 0.6
LCN1P31025 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC18.83■□□□□ 0.6
LCN1P31025 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
LCN1P31025 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms