Protein–RNA interactions for Protein: P27695

APEX1, DNA-(apurinic or apyrimidinic site) lyase, humanhuman

Known RBP Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1P27695 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
APEX1P27695 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.37■□□□□ 0.53
APEX1P27695 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
APEX1P27695 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
APEX1P27695 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
APEX1P27695 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
APEX1P27695 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
APEX1P27695 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
APEX1P27695 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC18.37■□□□□ 0.53
APEX1P27695 RNF146-206ENST00000480444 843 ntTSL 2 BASIC18.37■□□□□ 0.53
APEX1P27695 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC18.37■□□□□ 0.53
APEX1P27695 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC18.37■□□□□ 0.53
APEX1P27695 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
APEX1P27695 EEF1DP3-203ENST00000566025 782 ntBASIC18.37■□□□□ 0.53
APEX1P27695 AC053503.5-201ENST00000601508 636 ntBASIC18.37■□□□□ 0.53
APEX1P27695 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
APEX1P27695 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
APEX1P27695 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC18.37■□□□□ 0.53
APEX1P27695 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.37■□□□□ 0.53
APEX1P27695 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
APEX1P27695 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
APEX1P27695 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
APEX1P27695 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
APEX1P27695 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
APEX1P27695 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
APEX1P27695 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.37■□□□□ 0.53
APEX1P27695 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.37■□□□□ 0.53
APEX1P27695 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.37■□□□□ 0.53
APEX1P27695 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
APEX1P27695 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
APEX1P27695 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
APEX1P27695 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
APEX1P27695 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
APEX1P27695 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
APEX1P27695 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.36■□□□□ 0.53
APEX1P27695 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
APEX1P27695 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
APEX1P27695 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
APEX1P27695 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC18.36■□□□□ 0.53
APEX1P27695 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC18.36■□□□□ 0.53
APEX1P27695 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC18.36■□□□□ 0.53
APEX1P27695 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC18.36■□□□□ 0.53
APEX1P27695 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.36■□□□□ 0.53
APEX1P27695 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC18.36■□□□□ 0.53
APEX1P27695 AC004854.2-201ENST00000608450 1441 ntBASIC18.36■□□□□ 0.53
APEX1P27695 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
APEX1P27695 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
APEX1P27695 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
APEX1P27695 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
APEX1P27695 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC18.35■□□□□ 0.53
APEX1P27695 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
APEX1P27695 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
APEX1P27695 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
APEX1P27695 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
APEX1P27695 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
APEX1P27695 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
APEX1P27695 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
APEX1P27695 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC18.35■□□□□ 0.53
APEX1P27695 SERP1-208ENST00000491660 830 ntTSL 2 BASIC18.35■□□□□ 0.53
APEX1P27695 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
APEX1P27695 AC090192.1-201ENST00000517740 490 ntBASIC18.35■□□□□ 0.53
APEX1P27695 TESC-206ENST00000541210 936 ntTSL 3 BASIC18.35■□□□□ 0.53
APEX1P27695 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
APEX1P27695 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
APEX1P27695 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
APEX1P27695 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.35■□□□□ 0.53
APEX1P27695 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
APEX1P27695 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
APEX1P27695 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
APEX1P27695 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
APEX1P27695 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
APEX1P27695 NARF-205ENST00000412079 1760 ntTSL 5 BASIC18.35■□□□□ 0.53
APEX1P27695 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
APEX1P27695 AP004607.4-201ENST00000530158 1459 ntBASIC18.34■□□□□ 0.53
APEX1P27695 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
APEX1P27695 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
APEX1P27695 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
APEX1P27695 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
APEX1P27695 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
APEX1P27695 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC18.34■□□□□ 0.53
APEX1P27695 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.34■□□□□ 0.53
APEX1P27695 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
APEX1P27695 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC18.34■□□□□ 0.53
APEX1P27695 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC18.34■□□□□ 0.53
APEX1P27695 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC18.34■□□□□ 0.53
APEX1P27695 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC18.34■□□□□ 0.53
APEX1P27695 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC18.34■□□□□ 0.53
APEX1P27695 NTF6G-201ENST00000591094 616 ntBASIC18.34■□□□□ 0.53
APEX1P27695 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
APEX1P27695 AC104187.1-201ENST00000607510 612 ntBASIC18.34■□□□□ 0.53
APEX1P27695 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.34■□□□□ 0.53
APEX1P27695 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC18.34■□□□□ 0.53
APEX1P27695 RARRES2P11-201ENST00000635158 484 ntBASIC18.34■□□□□ 0.53
APEX1P27695 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
APEX1P27695 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
APEX1P27695 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
APEX1P27695 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
APEX1P27695 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
APEX1P27695 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.33■□□□□ 0.53
APEX1P27695 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms