Protein–RNA interactions for Protein: P25847

MSH2, DNA mismatch repair protein MSH2, yeastyeast

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH2P25847 ORC1YML065W 2745 nt3.12□□□□□ -1.91
MSH2P25847 YLR031WYLR031W 561 nt3.11□□□□□ -1.91
MSH2P25847 YPL216WYPL216W 3309 nt3.11□□□□□ -1.91
MSH2P25847 KSP1YHR082C 3090 nt3.11□□□□□ -1.91
MSH2P25847 YDL240C-AYDL240C-A 138 nt3.1□□□□□ -1.91
MSH2P25847 AYR1YIL124W 894 nt3.1□□□□□ -1.91
MSH2P25847 RNP1YLL046C 750 nt3.1□□□□□ -1.91
MSH2P25847 PRE8YML092C 753 nt3.1□□□□□ -1.91
MSH2P25847 YBL071CYBL071C 309 nt3.1□□□□□ -1.91
MSH2P25847 YPR089WYPR089W 2667 nt3.1□□□□□ -1.91
MSH2P25847 IRC10YOL015W 1761 nt3.1□□□□□ -1.91
MSH2P25847 YPL238CYPL238C 390 nt3.09□□□□□ -1.91
MSH2P25847 MZM1YDR493W 372 nt3.08□□□□□ -1.92
MSH2P25847 RTT102YGR275W 474 nt3.08□□□□□ -1.92
MSH2P25847 YNL010WYNL010W 726 nt3.08□□□□□ -1.92
MSH2P25847 YBL108WYBL108W 306 nt3.08□□□□□ -1.92
MSH2P25847 NMD2YHR077C 3270 nt3.08□□□□□ -1.92
MSH2P25847 TLC1TLC1 1301 nt3.08□□□□□ -1.92
MSH2P25847 AYT1YLL063C 1425 nt3.08□□□□□ -1.92
MSH2P25847 PRP8YHR165C 7242 nt3.08□□□□□ -1.92
MSH2P25847 snR79snR79 84 nt3.07□□□□□ -1.92
MSH2P25847 RPL40BYKR094C 387 nt3.07□□□□□ -1.92
MSH2P25847 RPS18BYML026C 441 nt3.07□□□□□ -1.92
MSH2P25847 YNL146WYNL146W 303 nt3.07□□□□□ -1.92
MSH2P25847 CRS5YOR031W 210 nt3.07□□□□□ -1.92
MSH2P25847 ATP3YBR039W 936 nt3.07□□□□□ -1.92
MSH2P25847 YSY6YBR162W-A 198 nt3.07□□□□□ -1.92
MSH2P25847 UTP14YML093W 2700 nt3.07□□□□□ -1.92
MSH2P25847 RIF1YBR275C 5751 nt3.06□□□□□ -1.92
MSH2P25847 YGL014C-AYGL014C-A 162 nt3.06□□□□□ -1.92
MSH2P25847 YML009C-AYML009C-A 327 nt3.06□□□□□ -1.92
MSH2P25847 PRP6YBR055C 2700 nt3.06□□□□□ -1.92
MSH2P25847 ROX1YPR065W 1107 nt3.06□□□□□ -1.92
MSH2P25847 RGC1YPR115W 3252 nt3.06□□□□□ -1.92
MSH2P25847 YHR078WYHR078W 1659 nt3.05□□□□□ -1.92
MSH2P25847 YME2YMR302C 2553 nt3.05□□□□□ -1.92
MSH2P25847 COQ10YOL008W 624 nt3.05□□□□□ -1.92
MSH2P25847 YPL038W-AYPL038W-A 192 nt3.05□□□□□ -1.92
MSH2P25847 YJR003CYJR003C 1560 nt3.04□□□□□ -1.92
MSH2P25847 SDC25YLL016W 3147 nt3.04□□□□□ -1.92
MSH2P25847 DBP10YDL031W 2988 nt3.04□□□□□ -1.92
MSH2P25847 PRE4YFR050C 801 nt3.04□□□□□ -1.92
MSH2P25847 TMA22YJR014W 597 nt3.04□□□□□ -1.92
MSH2P25847 YJR098CYJR098C 1971 nt3.03□□□□□ -1.92
MSH2P25847 FUN30YAL019W 3396 nt3.03□□□□□ -1.92
MSH2P25847 PTC5YOR090C 1719 nt3.03□□□□□ -1.92
MSH2P25847 YER023C-AYER023C-A 213 nt3.03□□□□□ -1.92
MSH2P25847 RPL23BYER117W 414 nt3.03□□□□□ -1.92
MSH2P25847 YKL136WYKL136W 399 nt3.03□□□□□ -1.92
MSH2P25847 RPL36AYMR194W 303 nt3.03□□□□□ -1.92
MSH2P25847 VTI1YMR197C 654 nt3.03□□□□□ -1.92
MSH2P25847 CDC24YAL041W 2565 nt3.03□□□□□ -1.93
MSH2P25847 NCL1YBL024W 2055 nt3.02□□□□□ -1.93
MSH2P25847 YLR278CYLR278C 4026 nt3.02□□□□□ -1.93
MSH2P25847 YDL025W-AYDL025W-A 105 nt3.02□□□□□ -1.93
MSH2P25847 HMF1YER057C 390 nt3.02□□□□□ -1.93
MSH2P25847 YPR016W-AYPR016W-A 261 nt3.02□□□□□ -1.93
MSH2P25847 BUB1YGR188C 3066 nt3.02□□□□□ -1.93
MSH2P25847 GCD6YDR211W 2139 nt3.02□□□□□ -1.93
MSH2P25847 GIN4YDR507C 3429 nt3.02□□□□□ -1.93
MSH2P25847 UBP11YKR098C 2154 nt3.01□□□□□ -1.93
MSH2P25847 SAK1YER129W 3429 nt3.01□□□□□ -1.93
MSH2P25847 YHL005CYHL005C 393 nt3.01□□□□□ -1.93
MSH2P25847 CGI121YML036W 546 nt3.01□□□□□ -1.93
MSH2P25847 YMR324CYMR324C 243 nt3.01□□□□□ -1.93
MSH2P25847 YIL082W-AYIL082W-A 4497 nt3.01□□□□□ -1.93
MSH2P25847 UBP14YBR058C 2346 nt3.01□□□□□ -1.93
MSH2P25847 YIL169CYIL169C 2988 nt3□□□□□ -1.93
MSH2P25847 YBT1YLL048C 4986 nt3□□□□□ -1.93
MSH2P25847 RGA2YDR379W 3030 nt3□□□□□ -1.93
MSH2P25847 snR70snR70 164 nt3□□□□□ -1.93
MSH2P25847 YER121WYER121W 345 nt3□□□□□ -1.93
MSH2P25847 PAU14YIL176C 363 nt3□□□□□ -1.93
MSH2P25847 YJL202CYJL202C 348 nt3□□□□□ -1.93
MSH2P25847 PAU1YJL223C 363 nt3□□□□□ -1.93
MSH2P25847 FCF2YLR051C 654 nt3□□□□□ -1.93
MSH2P25847 RPL9BYNL067W 576 nt3□□□□□ -1.93
MSH2P25847 LSM7YNL147W 348 nt3□□□□□ -1.93
MSH2P25847 DYN1YKR054C 12279 nt3□□□□□ -1.93
MSH2P25847 REV1YOR346W 2958 nt3□□□□□ -1.93
MSH2P25847 IPT1YDR072C 1584 nt3□□□□□ -1.93
MSH2P25847 SPO14YKR031C 5052 nt2.99□□□□□ -1.93
MSH2P25847 MPH1YIR002C 2982 nt2.99□□□□□ -1.93
MSH2P25847 TCB2YNL087W 3537 nt2.99□□□□□ -1.93
MSH2P25847 YFR056CYFR056C 369 nt2.99□□□□□ -1.93
MSH2P25847 LSO2YGR169C-A 279 nt2.99□□□□□ -1.93
MSH2P25847 YHR052W-AYHR052W-A 195 nt2.99□□□□□ -1.93
MSH2P25847 YHR054W-AYHR054W-A 195 nt2.99□□□□□ -1.93
MSH2P25847 YAL042C-AYAL042C-A 378 nt2.99□□□□□ -1.93
MSH2P25847 TMA10YLR327C 261 nt2.99□□□□□ -1.93
MSH2P25847 YPR146CYPR146C 330 nt2.99□□□□□ -1.93
MSH2P25847 HEH2YDR458C 1992 nt2.99□□□□□ -1.93
MSH2P25847 SNU114YKL173W 3027 nt2.99□□□□□ -1.93
MSH2P25847 YJL070CYJL070C 2667 nt2.98□□□□□ -1.93
MSH2P25847 FMP16YDR070C 282 nt2.98□□□□□ -1.93
MSH2P25847 YNL277W-AYNL277W-A 189 nt2.98□□□□□ -1.93
MSH2P25847 CAF120YNL278W 3183 nt2.98□□□□□ -1.93
MSH2P25847 HRD3YLR207W 2502 nt2.98□□□□□ -1.93
MSH2P25847 RLI1YDR091C 1827 nt2.98□□□□□ -1.93
MSH2P25847 VPS64YDR200C 1815 nt2.98□□□□□ -1.93
Retrieved 100 of 7,029 protein–RNA pairs in 77.7 ms