Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.05■□□□□ 0.64
CHMP24386 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CHMP24386 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CHMP24386 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
CHMP24386 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
CHMP24386 AC121338.2-201ENST00000622535 1744 ntBASIC19.05■□□□□ 0.64
CHMP24386 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CHMP24386 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.05■□□□□ 0.64
CHMP24386 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CHMP24386 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CHMP24386 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHMP24386 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHMP24386 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.04■□□□□ 0.64
CHMP24386 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHMP24386 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
CHMP24386 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHMP24386 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CHMP24386 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
CHMP24386 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
CHMP24386 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC19.04■□□□□ 0.64
CHMP24386 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC19.04■□□□□ 0.64
CHMP24386 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
CHMP24386 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.04■□□□□ 0.64
CHMP24386 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.04■□□□□ 0.64
CHMP24386 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHMP24386 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CHMP24386 AC011767.1-201ENST00000617410 1153 ntBASIC19.04■□□□□ 0.64
CHMP24386 MYCNOS-205ENST00000641950 531 ntBASIC19.04■□□□□ 0.64
CHMP24386 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHMP24386 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.04■□□□□ 0.64
CHMP24386 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CHMP24386 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHMP24386 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.03■□□□□ 0.64
CHMP24386 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHMP24386 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
CHMP24386 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHMP24386 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHMP24386 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHMP24386 NAA20-201ENST00000310450 920 ntTSL 2 BASIC19.03■□□□□ 0.64
CHMP24386 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC19.03■□□□□ 0.64
CHMP24386 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC19.03■□□□□ 0.64
CHMP24386 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC19.03■□□□□ 0.64
CHMP24386 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.03■□□□□ 0.64
CHMP24386 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
CHMP24386 AFG3L1P-217ENST00000557444 2447 ntBASIC19.03■□□□□ 0.64
CHMP24386 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC19.03■□□□□ 0.64
CHMP24386 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.03■□□□□ 0.64
CHMP24386 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
CHMP24386 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.03■□□□□ 0.64
CHMP24386 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHMP24386 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.02■□□□□ 0.64
CHMP24386 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.02■□□□□ 0.64
CHMP24386 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CHMP24386 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CHMP24386 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
CHMP24386 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CHMP24386 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CHMP24386 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
CHMP24386 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CHMP24386 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CHMP24386 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC19.02■□□□□ 0.64
CHMP24386 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC19.02■□□□□ 0.64
CHMP24386 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CHMP24386 MFSD11-216ENST00000590393 1141 ntBASIC19.02■□□□□ 0.64
CHMP24386 MDK-213ENST00000617138 635 ntTSL 2 BASIC19.02■□□□□ 0.64
CHMP24386 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
CHMP24386 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.02■□□□□ 0.64
CHMP24386 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.02■□□□□ 0.63
CHMP24386 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
CHMP24386 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CHMP24386 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
CHMP24386 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
CHMP24386 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CHMP24386 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CHMP24386 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CHMP24386 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CHMP24386 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CHMP24386 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
CHMP24386 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CHMP24386 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.01■□□□□ 0.63
CHMP24386 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
CHMP24386 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CHMP24386 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC19.01■□□□□ 0.63
CHMP24386 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC19.01■□□□□ 0.63
CHMP24386 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC19.01■□□□□ 0.63
CHMP24386 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CHMP24386 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
CHMP24386 AC007225.1-201ENST00000566331 1836 ntBASIC19.01■□□□□ 0.63
CHMP24386 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.01■□□□□ 0.63
CHMP24386 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CHMP24386 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.01■□□□□ 0.63
CHMP24386 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
CHMP24386 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CHMP24386 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19■□□□□ 0.63
CHMP24386 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC19■□□□□ 0.63
CHMP24386 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC19■□□□□ 0.63
CHMP24386 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19■□□□□ 0.63
CHMP24386 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19■□□□□ 0.63
CHMP24386 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
CHMP24386 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms