Protein–RNA interactions for Protein: P23396

RPS3, 40S ribosomal protein S3, humanhuman

Known RBP eCLIP

Length 243 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3P23396 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC18.99■□□□□ 0.631e-6■■■■□ 24.9
RPS3P23396 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC16.76■□□□□ 0.271e-6■■■■□ 24.9
RPS3P23396 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC15.71■□□□□ 0.111e-6■■■■□ 24.9
RPS3P23396 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC15.71■□□□□ 0.111e-6■■■■□ 24.9
RPS3P23396 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC15.71■□□□□ 0.111e-6■■■■□ 24.9
RPS3P23396 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.061e-6■■■■□ 24.9
RPS3P23396 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.031e-6■■■■□ 24.9
RPS3P23396 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.031e-6■■■■□ 24.9
RPS3P23396 CNOT8-206ENST00000518775 920 ntTSL 514.93□□□□□ -0.021e-6■■■■□ 24.9
RPS3P23396 CNOT8-219ENST00000521729 1068 ntTSL 213.96□□□□□ -0.171e-6■■■■□ 24.9
RPS3P23396 CNOT8-217ENST00000521450 1158 ntTSL 2 BASIC12.55□□□□□ -0.41e-6■■■■□ 24.9
RPS3P23396 UQCRC2-209ENST00000567597 312 ntTSL 51.58□□□□□ -2.163e-16■■■■□ 24.9
RPS3P23396 COPB1-201ENST00000249923 3481 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.832e-7■■■■□ 24.9
RPS3P23396 COPB1-202ENST00000439561 3382 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.012e-7■■■■□ 24.9
RPS3P23396 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.533e-6■■■■□ 24.9
RPS3P23396 RPN1-202ENST00000476931 526 ntTSL 416.65■□□□□ 0.268e-18■■■■□ 24.9
RPS3P23396 CCT7-206ENST00000464397 583 ntTSL 215.72■□□□□ 0.116e-25■■■■□ 24.9
RPS3P23396 FOXRED2-205ENST00000423980 567 ntTSL 419.33■□□□□ 0.683e-16■■■■□ 24.9
RPS3P23396 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.263e-16■■■■□ 24.9
RPS3P23396 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.013e-16■■■■□ 24.9
RPS3P23396 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.133e-16■■■■□ 24.9
RPS3P23396 COL4A5-205ENST00000483338 3622 ntTSL 1 (best)7.73□□□□□ -1.174e-6■■■■□ 24.9
RPS3P23396 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.049e-9■■■■□ 24.9
RPS3P23396 RNASE1-204ENST00000412779 896 ntAPPRIS P1 TSL 2 BASIC9.7□□□□□ -0.869e-9■■■■□ 24.9
RPS3P23396 RNASE1-205ENST00000555698 655 ntTSL 3 BASIC9.43□□□□□ -0.99e-9■■■■□ 24.9
RPS3P23396 RNASE1-203ENST00000397970 769 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.039e-9■■■■□ 24.9
RPS3P23396 RNASE1-201ENST00000340900 878 ntAPPRIS P1 TSL 2 BASIC8.61□□□□□ -1.039e-9■■■■□ 24.9
RPS3P23396 AP000781.2-201ENST00000534081 1639 ntTSL 213.68□□□□□ -0.223e-6■■■■□ 24.9
RPS3P23396 TGM2-202ENST00000373403 1018 ntTSL 316.13■□□□□ 0.178e-8■■■■□ 24.9
RPS3P23396 TGM2-206ENST00000474777 2287 ntTSL 1 (best)15.97■□□□□ 0.158e-8■■■■□ 24.9
RPS3P23396 MGST3-209ENST00000477450 364 ntTSL 31.75□□□□□ -2.131e-9■■■■□ 24.9
RPS3P23396 HSPA8-220ENST00000533238 465 ntTSL 36.23□□□□□ -1.419e-11■■■■□ 24.9
RPS3P23396 F10-204ENST00000410083 1211 ntTSL 1 (best)13.93□□□□□ -0.181e-6■■■■□ 24.9
RPS3P23396 F10-205ENST00000477269 907 ntTSL 1 (best)13.61□□□□□ -0.231e-6■■■■□ 24.9
RPS3P23396 PET100-207ENST00000623154 1815 nt22.48■■□□□ 1.191e-6■■■■□ 24.9
RPS3P23396 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.869e-7■■■■□ 24.9
RPS3P23396 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.831e-6■■■■□ 24.9
RPS3P23396 AC008763.2-202ENST00000599243 570 ntAPPRIS ALT2 TSL 418.09■□□□□ 0.491e-6■■■■□ 24.9
RPS3P23396 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.479e-7■■■■□ 24.9
RPS3P23396 NSUN5-206ENST00000471461 2286 ntTSL 217.06■□□□□ 0.329e-7■■■■□ 24.9
RPS3P23396 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.199e-7■■■■□ 24.9
RPS3P23396 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.139e-7■■■■□ 24.9
RPS3P23396 AC008763.2-201ENST00000598664 537 ntAPPRIS P5 TSL 515.29■□□□□ 0.041e-6■■■■□ 24.9
RPS3P23396 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.261e-6■■■■□ 24.9
RPS3P23396 PET100-204ENST00000600836 474 ntTSL 311.41□□□□□ -0.581e-6■■■■□ 24.9
RPS3P23396 PET100-201ENST00000456958 219 ntTSL 2 BASIC8.13□□□□□ -1.111e-6■■■■□ 24.9
RPS3P23396 PET100-203ENST00000598540 375 ntTSL 35.18□□□□□ -1.581e-6■■■■□ 24.9
RPS3P23396 TMEM248-205ENST00000433271 1610 ntTSL 1 (best)26.2■■□□□ 1.786e-11■■■■□ 24.9
RPS3P23396 TMEM248-207ENST00000607045 690 ntTSL 320.89■□□□□ 0.936e-11■■■■□ 24.9
RPS3P23396 TMEM248-201ENST00000341567 4229 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.346e-11■■■■□ 24.9
RPS3P23396 SLC2A1-209ENST00000630821 591 ntTSL 213.51□□□□□ -0.253e-73■■■■□ 24.8
RPS3P23396 PHGDH-213ENST00000641272 758 nt15.96■□□□□ 0.155e-8■■■■□ 24.8
RPS3P23396 DTD1-203ENST00000618693 695 ntTSL 513.21□□□□□ -0.291e-6■■■■□ 24.8
RPS3P23396 SMIM26-202ENST00000435844 575 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.511e-6■■■■□ 24.8
RPS3P23396 SMIM26-201ENST00000411646 505 ntAPPRIS P5 TSL 1 (best) BASIC9.13□□□□□ -0.951e-6■■■■□ 24.8
RPS3P23396 ATP5G1-208ENST00000513781 759 ntTSL 313.78□□□□□ -0.27e-12■■■■□ 24.8
RPS3P23396 ATP5G1-204ENST00000503641 539 ntTSL 3 BASIC10.96□□□□□ -0.657e-12■■■■□ 24.8
RPS3P23396 ATP5G1-201ENST00000355938 598 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.697e-12■■■■□ 24.8
RPS3P23396 ATP5G1-206ENST00000506855 468 ntTSL 3 BASIC10.29□□□□□ -0.767e-12■■■■□ 24.8
RPS3P23396 ATP5G1-202ENST00000393366 614 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.867e-12■■■■□ 24.8
RPS3P23396 ATP5G1-207ENST00000513347 2214 ntTSL 29.07□□□□□ -0.967e-12■■■■□ 24.8
RPS3P23396 VARS-228ENST00000495010 1007 ntTSL 513.49□□□□□ -0.258e-9■■■■□ 24.8
RPS3P23396 NDUFS2-208ENST00000478866 1076 ntTSL 219.07■□□□□ 0.643e-10■■■■□ 24.8
RPS3P23396 ATP5B-211ENST00000553007 814 ntTSL 518.44■□□□□ 0.546e-23■■■■□ 24.8
RPS3P23396 NARS-204ENST00000586807 1608 ntTSL 211.45□□□□□ -0.581e-6■■■■□ 24.8
RPS3P23396 NARS-201ENST00000256854 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.591e-6■■■■□ 24.8
RPS3P23396 CLSTN3-212ENST00000541770 568 ntTSL 38.47□□□□□ -1.051e-9■■■■□ 24.8
RPS3P23396 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.164e-7■■■■□ 24.8
RPS3P23396 MT1E-202ENST00000330439 729 ntTSL 1 (best) BASIC12.16□□□□□ -0.464e-7■■■■□ 24.8
RPS3P23396 MT1E-203ENST00000568293 332 ntTSL 2 BASIC9.9□□□□□ -0.824e-7■■■■□ 24.8
RPS3P23396 PLD3-214ENST00000492243 710 ntTSL 214.45□□□□□ -0.14e-8■■■■□ 24.8
RPS3P23396 ATP5O-208ENST00000491703 2839 ntTSL 213.46□□□□□ -0.259e-7■■■■□ 24.8
RPS3P23396 ATP5O-205ENST00000431254 583 ntTSL 29.25□□□□□ -0.939e-7■■■■□ 24.8
RPS3P23396 ATP5O-201ENST00000290299 932 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.989e-7■■■■□ 24.8
RPS3P23396 AP000311.1-201ENST00000429238 1078 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.019e-7■■■■□ 24.8
RPS3P23396 MARS-230ENST00000552914 734 ntTSL 36.03□□□□□ -1.442e-6■■■■□ 24.8
RPS3P23396 RNF181-206ENST00000461845 623 ntTSL 211.48□□□□□ -0.572e-7■■■■□ 24.7
RPS3P23396 RNF181-202ENST00000414390 327 ntTSL 210.8□□□□□ -0.681e-11■■■■□ 24.7
RPS3P23396 URM1-206ENST00000483206 731 ntTSL 214.57□□□□□ -0.081e-6■■■■□ 24.7
RPS3P23396 URM1-205ENST00000470840 723 ntTSL 213.37□□□□□ -0.271e-6■■■■□ 24.7
RPS3P23396 URM1-203ENST00000372853 2650 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.641e-6■■■■□ 24.7
RPS3P23396 URM1-204ENST00000452446 2944 ntTSL 2 BASIC10.19□□□□□ -0.781e-6■■■■□ 24.7
RPS3P23396 URM1-202ENST00000372850 3045 ntTSL 1 (best) BASIC9.33□□□□□ -0.921e-6■■■■□ 24.7
RPS3P23396 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC15.2■□□□□ 0.021e-8■■■■□ 24.7
RPS3P23396 ALG1-206ENST00000591822 1689 ntTSL 1 (best)22.75■■□□□ 1.239e-7■■■■□ 24.7
RPS3P23396 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.879e-7■■■■□ 24.7
RPS3P23396 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC14.54□□□□□ -0.089e-7■■■■□ 24.7
RPS3P23396 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC28.24■■■□□ 2.112e-7■■■■□ 24.7
RPS3P23396 CD151-220ENST00000532045 1803 ntTSL 520.6■□□□□ 0.892e-7■■■■□ 24.7
RPS3P23396 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.622e-7■■■■□ 24.7
RPS3P23396 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.582e-7■■■■□ 24.7
RPS3P23396 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.42e-7■■■■□ 24.7
RPS3P23396 CD151-218ENST00000530726 1407 ntTSL 513.01□□□□□ -0.332e-7■■■■□ 24.7
RPS3P23396 CD74-212ENST00000524315 584 ntTSL 5 BASIC14.3□□□□□ -0.124e-7■■■■□ 24.7
RPS3P23396 CD74-206ENST00000518797 1727 ntAPPRIS ALT2 TSL 213.92□□□□□ -0.184e-7■■■■□ 24.7
RPS3P23396 CD74-203ENST00000377795 1138 ntTSL 1 (best) BASIC13.08□□□□□ -0.324e-7■■■■□ 24.7
RPS3P23396 CD74-202ENST00000353334 1449 ntTSL 1 (best) BASIC12.47□□□□□ -0.414e-7■■■■□ 24.7
RPS3P23396 CD74-201ENST00000009530 981 ntAPPRIS P2 TSL 2 BASIC11.7□□□□□ -0.544e-7■■■■□ 24.7
RPS3P23396 CD74-209ENST00000523208 767 ntTSL 511.38□□□□□ -0.594e-7■■■■□ 24.7
RPS3P23396 CCT7-212ENST00000482064 567 ntTSL 48.44□□□□□ -1.065e-8■■■■□ 24.7
Retrieved 100 of 24,271 protein–RNA pairs in 194.2 ms