Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
MMP8P22894 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
MMP8P22894 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
MMP8P22894 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
MMP8P22894 PARL-206ENST00000435888 1098 ntTSL 5 BASIC21.52■■□□□ 1.04
MMP8P22894 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC21.52■■□□□ 1.04
MMP8P22894 IKBKGP1-201ENST00000612193 1073 ntBASIC21.52■■□□□ 1.04
MMP8P22894 AC231657.2-201ENST00000624556 255 ntBASIC21.52■■□□□ 1.04
MMP8P22894 PARP1-210ENST00000629232 477 ntTSL 5 BASIC21.52■■□□□ 1.04
MMP8P22894 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC21.52■■□□□ 1.04
MMP8P22894 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
MMP8P22894 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
MMP8P22894 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
MMP8P22894 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
MMP8P22894 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
MMP8P22894 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
MMP8P22894 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.03
MMP8P22894 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
MMP8P22894 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
MMP8P22894 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC21.51■■□□□ 1.03
MMP8P22894 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
MMP8P22894 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
MMP8P22894 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
MMP8P22894 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
MMP8P22894 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC21.51■■□□□ 1.03
MMP8P22894 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC21.51■■□□□ 1.03
MMP8P22894 AC087633.2-202ENST00000565166 1439 ntBASIC21.51■■□□□ 1.03
MMP8P22894 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
MMP8P22894 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
MMP8P22894 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
MMP8P22894 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC21.51■■□□□ 1.03
MMP8P22894 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC21.5■■□□□ 1.03
MMP8P22894 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
MMP8P22894 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
MMP8P22894 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC21.5■■□□□ 1.03
MMP8P22894 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
MMP8P22894 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
MMP8P22894 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
MMP8P22894 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
MMP8P22894 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
MMP8P22894 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC21.5■■□□□ 1.03
MMP8P22894 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
MMP8P22894 METTL26-203ENST00000397664 604 ntTSL 2 BASIC21.5■■□□□ 1.03
MMP8P22894 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
MMP8P22894 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC21.5■■□□□ 1.03
MMP8P22894 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
MMP8P22894 MDK-213ENST00000617138 635 ntTSL 2 BASIC21.5■■□□□ 1.03
MMP8P22894 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
MMP8P22894 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
MMP8P22894 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
MMP8P22894 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC21.5■■□□□ 1.03
MMP8P22894 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC21.5■■□□□ 1.03
MMP8P22894 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
MMP8P22894 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC21.5■■□□□ 1.03
MMP8P22894 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC21.5■■□□□ 1.03
MMP8P22894 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
MMP8P22894 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
MMP8P22894 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC21.49■■□□□ 1.03
MMP8P22894 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
MMP8P22894 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
MMP8P22894 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
MMP8P22894 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
MMP8P22894 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
MMP8P22894 AC007322.1-201ENST00000426983 750 ntBASIC21.49■■□□□ 1.03
MMP8P22894 APTR-203ENST00000430801 583 ntTSL 5 BASIC21.49■■□□□ 1.03
MMP8P22894 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
MMP8P22894 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC21.49■■□□□ 1.03
MMP8P22894 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC21.49■■□□□ 1.03
MMP8P22894 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC21.49■■□□□ 1.03
MMP8P22894 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC21.49■■□□□ 1.03
MMP8P22894 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
MMP8P22894 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC21.49■■□□□ 1.03
MMP8P22894 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC21.49■■□□□ 1.03
MMP8P22894 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
MMP8P22894 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
MMP8P22894 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC21.49■■□□□ 1.03
MMP8P22894 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
MMP8P22894 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
MMP8P22894 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
MMP8P22894 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
MMP8P22894 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
MMP8P22894 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
MMP8P22894 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
MMP8P22894 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.48■■□□□ 1.03
MMP8P22894 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC21.48■■□□□ 1.03
MMP8P22894 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC21.48■■□□□ 1.03
MMP8P22894 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
MMP8P22894 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
MMP8P22894 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC21.48■■□□□ 1.03
MMP8P22894 AC004911.1-201ENST00000416316 871 ntBASIC21.48■■□□□ 1.03
MMP8P22894 CYP2T1P-201ENST00000432607 1285 ntBASIC21.48■■□□□ 1.03
MMP8P22894 GLI3-203ENST00000437480 451 ntTSL 2 BASIC21.48■■□□□ 1.03
MMP8P22894 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC21.48■■□□□ 1.03
MMP8P22894 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC21.48■■□□□ 1.03
MMP8P22894 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC21.48■■□□□ 1.03
MMP8P22894 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
MMP8P22894 AC100791.3-201ENST00000617619 330 ntBASIC21.48■■□□□ 1.03
MMP8P22894 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
MMP8P22894 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
MMP8P22894 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms