Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
ERCC2P18074 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ERCC2P18074 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
ERCC2P18074 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC21.02■□□□□ 0.96
ERCC2P18074 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ERCC2P18074 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
ERCC2P18074 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
ERCC2P18074 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ERCC2P18074 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC21.02■□□□□ 0.96
ERCC2P18074 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC21.02■□□□□ 0.96
ERCC2P18074 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
ERCC2P18074 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
ERCC2P18074 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC21.02■□□□□ 0.96
ERCC2P18074 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ERCC2P18074 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
ERCC2P18074 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
ERCC2P18074 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
ERCC2P18074 MIR663A-201ENST00000385250 93 ntBASIC21.02■□□□□ 0.96
ERCC2P18074 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
ERCC2P18074 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC21.02■□□□□ 0.96
ERCC2P18074 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC21.02■□□□□ 0.96
ERCC2P18074 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
ERCC2P18074 AC100791.3-201ENST00000617619 330 ntBASIC21.02■□□□□ 0.96
ERCC2P18074 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC21.02■□□□□ 0.96
ERCC2P18074 AC092667.1-201ENST00000434301 2586 ntBASIC21.02■□□□□ 0.96
ERCC2P18074 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ERCC2P18074 KRT8P36-201ENST00000489121 1440 ntBASIC21.02■□□□□ 0.96
ERCC2P18074 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
ERCC2P18074 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
ERCC2P18074 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
ERCC2P18074 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC21.01■□□□□ 0.95
ERCC2P18074 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC21.01■□□□□ 0.95
ERCC2P18074 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
ERCC2P18074 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ERCC2P18074 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ERCC2P18074 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC21.01■□□□□ 0.95
ERCC2P18074 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC21.01■□□□□ 0.95
ERCC2P18074 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC21.01■□□□□ 0.95
ERCC2P18074 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC21.01■□□□□ 0.95
ERCC2P18074 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC21.01■□□□□ 0.95
ERCC2P18074 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
ERCC2P18074 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ERCC2P18074 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ERCC2P18074 AC087633.2-202ENST00000565166 1439 ntBASIC21.01■□□□□ 0.95
ERCC2P18074 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC21.01■□□□□ 0.95
ERCC2P18074 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC21.01■□□□□ 0.95
ERCC2P18074 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ERCC2P18074 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC21.01■□□□□ 0.95
ERCC2P18074 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ERCC2P18074 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC21.01■□□□□ 0.95
ERCC2P18074 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ERCC2P18074 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC21.01■□□□□ 0.95
ERCC2P18074 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ERCC2P18074 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
ERCC2P18074 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
ERCC2P18074 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ERCC2P18074 MCRIP2P1-201ENST00000394346 511 ntBASIC21■□□□□ 0.95
ERCC2P18074 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC21■□□□□ 0.95
ERCC2P18074 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC21■□□□□ 0.95
ERCC2P18074 AC093787.1-201ENST00000450396 207 ntBASIC21■□□□□ 0.95
ERCC2P18074 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
ERCC2P18074 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC21■□□□□ 0.95
ERCC2P18074 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC21■□□□□ 0.95
ERCC2P18074 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC21■□□□□ 0.95
ERCC2P18074 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC21■□□□□ 0.95
ERCC2P18074 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ERCC2P18074 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
ERCC2P18074 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
ERCC2P18074 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ERCC2P18074 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
ERCC2P18074 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ERCC2P18074 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
ERCC2P18074 GABARAPL3-202ENST00000624044 1851 ntBASIC20.99■□□□□ 0.95
ERCC2P18074 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ERCC2P18074 AL512625.2-201ENST00000417533 625 ntBASIC20.99■□□□□ 0.95
ERCC2P18074 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC20.99■□□□□ 0.95
ERCC2P18074 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
ERCC2P18074 AC133552.2-202ENST00000575694 574 ntBASIC20.99■□□□□ 0.95
ERCC2P18074 AC020907.5-201ENST00000624372 1936 ntBASIC20.99■□□□□ 0.95
ERCC2P18074 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
ERCC2P18074 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.99■□□□□ 0.95
ERCC2P18074 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
ERCC2P18074 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.99■□□□□ 0.95
ERCC2P18074 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.99■□□□□ 0.95
ERCC2P18074 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
ERCC2P18074 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC20.99■□□□□ 0.95
ERCC2P18074 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ERCC2P18074 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
ERCC2P18074 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.98■□□□□ 0.95
ERCC2P18074 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.98■□□□□ 0.95
ERCC2P18074 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.98■□□□□ 0.95
ERCC2P18074 AC010980.2-201ENST00000587099 1412 ntBASIC20.98■□□□□ 0.95
ERCC2P18074 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC20.98■□□□□ 0.95
ERCC2P18074 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
ERCC2P18074 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ERCC2P18074 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC20.98■□□□□ 0.95
ERCC2P18074 PGM5P4-201ENST00000421970 445 ntBASIC20.98■□□□□ 0.95
ERCC2P18074 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC20.98■□□□□ 0.95
ERCC2P18074 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.98■□□□□ 0.95
ERCC2P18074 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms