Protein–RNA interactions for Protein: P12644

BMP4, Bone morphogenetic protein 4, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4P12644 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
BMP4P12644 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
BMP4P12644 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
BMP4P12644 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
BMP4P12644 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
BMP4P12644 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.66■□□□□ 0.58
BMP4P12644 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
BMP4P12644 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
BMP4P12644 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
BMP4P12644 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
BMP4P12644 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC18.66■□□□□ 0.58
BMP4P12644 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
BMP4P12644 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
BMP4P12644 EI24-211ENST00000534546 1544 ntTSL 2 BASIC18.65■□□□□ 0.58
BMP4P12644 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
BMP4P12644 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
BMP4P12644 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
BMP4P12644 NTF6G-201ENST00000591094 616 ntBASIC18.65■□□□□ 0.58
BMP4P12644 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
BMP4P12644 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.65■□□□□ 0.58
BMP4P12644 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
BMP4P12644 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
BMP4P12644 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.65■□□□□ 0.58
BMP4P12644 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC18.65■□□□□ 0.58
BMP4P12644 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
BMP4P12644 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.64■□□□□ 0.58
BMP4P12644 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC18.64■□□□□ 0.58
BMP4P12644 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
BMP4P12644 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
BMP4P12644 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
BMP4P12644 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC18.64■□□□□ 0.57
BMP4P12644 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
BMP4P12644 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
BMP4P12644 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.64■□□□□ 0.57
BMP4P12644 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.64■□□□□ 0.57
BMP4P12644 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
BMP4P12644 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC18.64■□□□□ 0.57
BMP4P12644 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
BMP4P12644 HACD1-201ENST00000326961 773 ntTSL 2 BASIC18.64■□□□□ 0.57
BMP4P12644 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC18.64■□□□□ 0.57
BMP4P12644 AL031602.1-201ENST00000633169 911 ntBASIC18.64■□□□□ 0.57
BMP4P12644 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
BMP4P12644 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
BMP4P12644 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
BMP4P12644 TNXA-203ENST00000507684 2038 ntBASIC18.64■□□□□ 0.57
BMP4P12644 AC004408.2-201ENST00000623613 2777 ntBASIC18.64■□□□□ 0.57
BMP4P12644 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
BMP4P12644 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
BMP4P12644 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
BMP4P12644 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.63■□□□□ 0.57
BMP4P12644 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
BMP4P12644 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.63■□□□□ 0.57
BMP4P12644 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
BMP4P12644 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
BMP4P12644 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC18.63■□□□□ 0.57
BMP4P12644 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
BMP4P12644 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
BMP4P12644 AP000974.1-201ENST00000623909 2387 ntBASIC18.63■□□□□ 0.57
BMP4P12644 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
BMP4P12644 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
BMP4P12644 BX005040.4-201ENST00000637145 1518 ntBASIC18.63■□□□□ 0.57
BMP4P12644 PARN-205ENST00000539279 1557 ntTSL 2 BASIC18.63■□□□□ 0.57
BMP4P12644 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
BMP4P12644 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
BMP4P12644 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
BMP4P12644 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
BMP4P12644 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
BMP4P12644 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
BMP4P12644 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
BMP4P12644 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
BMP4P12644 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
BMP4P12644 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
BMP4P12644 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
BMP4P12644 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
BMP4P12644 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
BMP4P12644 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
BMP4P12644 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC18.62■□□□□ 0.57
BMP4P12644 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC18.62■□□□□ 0.57
BMP4P12644 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC18.62■□□□□ 0.57
BMP4P12644 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC18.62■□□□□ 0.57
BMP4P12644 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
BMP4P12644 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC18.62■□□□□ 0.57
BMP4P12644 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC18.62■□□□□ 0.57
BMP4P12644 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
BMP4P12644 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC18.62■□□□□ 0.57
BMP4P12644 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
BMP4P12644 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
BMP4P12644 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC18.62■□□□□ 0.57
BMP4P12644 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
BMP4P12644 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
BMP4P12644 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
BMP4P12644 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.62■□□□□ 0.57
BMP4P12644 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
BMP4P12644 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
BMP4P12644 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
BMP4P12644 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
BMP4P12644 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
BMP4P12644 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
BMP4P12644 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
BMP4P12644 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms