Protein–RNA interactions for Protein: P0CG40

SP9, Transcription factor Sp9, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP9P0CG40 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.34■□□□□ 0.85
SP9P0CG40 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC20.34■□□□□ 0.85
SP9P0CG40 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SP9P0CG40 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC20.34■□□□□ 0.85
SP9P0CG40 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SP9P0CG40 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
SP9P0CG40 AL356652.1-201ENST00000615962 565 ntBASIC20.34■□□□□ 0.85
SP9P0CG40 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SP9P0CG40 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SP9P0CG40 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SP9P0CG40 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC20.33■□□□□ 0.85
SP9P0CG40 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SP9P0CG40 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC20.33■□□□□ 0.85
SP9P0CG40 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SP9P0CG40 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC20.33■□□□□ 0.85
SP9P0CG40 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC20.33■□□□□ 0.85
SP9P0CG40 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
SP9P0CG40 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
SP9P0CG40 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SP9P0CG40 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SP9P0CG40 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC20.33■□□□□ 0.85
SP9P0CG40 AP002982.1-201ENST00000492365 877 ntBASIC20.33■□□□□ 0.85
SP9P0CG40 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC20.33■□□□□ 0.85
SP9P0CG40 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC20.33■□□□□ 0.85
SP9P0CG40 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SP9P0CG40 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.33■□□□□ 0.84
SP9P0CG40 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
SP9P0CG40 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
SP9P0CG40 AC010542.4-201ENST00000563151 1910 ntBASIC20.33■□□□□ 0.84
SP9P0CG40 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SP9P0CG40 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
SP9P0CG40 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC20.33■□□□□ 0.84
SP9P0CG40 AC093323.1-202ENST00000635031 2045 ntBASIC20.32■□□□□ 0.84
SP9P0CG40 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SP9P0CG40 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SP9P0CG40 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
SP9P0CG40 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SP9P0CG40 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.32■□□□□ 0.84
SP9P0CG40 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SP9P0CG40 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC20.32■□□□□ 0.84
SP9P0CG40 UPK3BP1-201ENST00000428678 509 ntBASIC20.32■□□□□ 0.84
SP9P0CG40 TPM4P1-201ENST00000436100 807 ntBASIC20.32■□□□□ 0.84
SP9P0CG40 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC20.32■□□□□ 0.84
SP9P0CG40 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SP9P0CG40 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SP9P0CG40 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SP9P0CG40 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SP9P0CG40 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SP9P0CG40 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SP9P0CG40 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SP9P0CG40 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SP9P0CG40 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SP9P0CG40 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC20.31■□□□□ 0.84
SP9P0CG40 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC20.31■□□□□ 0.84
SP9P0CG40 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SP9P0CG40 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC20.31■□□□□ 0.84
SP9P0CG40 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC20.31■□□□□ 0.84
SP9P0CG40 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC20.31■□□□□ 0.84
SP9P0CG40 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.31■□□□□ 0.84
SP9P0CG40 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SP9P0CG40 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SP9P0CG40 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
SP9P0CG40 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC20.3■□□□□ 0.84
SP9P0CG40 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SP9P0CG40 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SP9P0CG40 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SP9P0CG40 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SP9P0CG40 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
SP9P0CG40 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SP9P0CG40 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SP9P0CG40 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC20.3■□□□□ 0.84
SP9P0CG40 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC20.3■□□□□ 0.84
SP9P0CG40 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SP9P0CG40 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC20.3■□□□□ 0.84
SP9P0CG40 LTBR-211ENST00000543190 785 ntTSL 3 BASIC20.3■□□□□ 0.84
SP9P0CG40 AC010203.1-204ENST00000548782 407 ntBASIC20.3■□□□□ 0.84
SP9P0CG40 AL121894.2-201ENST00000602977 491 ntBASIC20.3■□□□□ 0.84
SP9P0CG40 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC20.3■□□□□ 0.84
SP9P0CG40 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.3■□□□□ 0.84
SP9P0CG40 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SP9P0CG40 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SP9P0CG40 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
SP9P0CG40 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SP9P0CG40 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SP9P0CG40 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC20.29■□□□□ 0.84
SP9P0CG40 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SP9P0CG40 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
SP9P0CG40 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SP9P0CG40 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SP9P0CG40 AC116562.2-201ENST00000507042 360 ntBASIC20.29■□□□□ 0.84
SP9P0CG40 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC20.29■□□□□ 0.84
SP9P0CG40 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC20.29■□□□□ 0.84
SP9P0CG40 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
SP9P0CG40 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC20.29■□□□□ 0.84
SP9P0CG40 AC006011.2-201ENST00000621313 1158 ntBASIC20.29■□□□□ 0.84
SP9P0CG40 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SP9P0CG40 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SP9P0CG40 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SP9P0CG40 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SP9P0CG40 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms