Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC15.81■□□□□ 0.12
CXCL1P09341 AL133373.2-201ENST00000623187 2828 ntBASIC15.81■□□□□ 0.12
CXCL1P09341 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CXCL1P09341 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CXCL1P09341 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CXCL1P09341 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CXCL1P09341 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CXCL1P09341 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CXCL1P09341 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CXCL1P09341 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
CXCL1P09341 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CXCL1P09341 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
CXCL1P09341 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC15.81■□□□□ 0.12
CXCL1P09341 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC15.81■□□□□ 0.12
CXCL1P09341 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC15.81■□□□□ 0.12
CXCL1P09341 AP004607.7-201ENST00000527152 1677 ntBASIC15.81■□□□□ 0.12
CXCL1P09341 AC079089.2-201ENST00000531211 1277 ntBASIC15.81■□□□□ 0.12
CXCL1P09341 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CXCL1P09341 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC15.81■□□□□ 0.12
CXCL1P09341 AP000997.3-201ENST00000623333 2250 ntBASIC15.81■□□□□ 0.12
CXCL1P09341 AL031602.1-201ENST00000633169 911 ntBASIC15.81■□□□□ 0.12
CXCL1P09341 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC15.81■□□□□ 0.12
CXCL1P09341 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CXCL1P09341 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC15.81■□□□□ 0.12
CXCL1P09341 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CXCL1P09341 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CXCL1P09341 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
CXCL1P09341 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC15.8■□□□□ 0.12
CXCL1P09341 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CXCL1P09341 AC018470.1-201ENST00000624790 3129 ntBASIC15.8■□□□□ 0.12
CXCL1P09341 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
CXCL1P09341 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CXCL1P09341 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC15.8■□□□□ 0.12
CXCL1P09341 BX664725.1-201ENST00000438252 379 ntBASIC15.8■□□□□ 0.12
CXCL1P09341 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CXCL1P09341 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CXCL1P09341 AL031848.2-201ENST00000607670 837 ntBASIC15.8■□□□□ 0.12
CXCL1P09341 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC15.8■□□□□ 0.12
CXCL1P09341 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CXCL1P09341 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CXCL1P09341 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
CXCL1P09341 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC15.8■□□□□ 0.12
CXCL1P09341 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CXCL1P09341 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CXCL1P09341 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CXCL1P09341 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CXCL1P09341 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CXCL1P09341 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CXCL1P09341 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CXCL1P09341 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CXCL1P09341 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC15.79■□□□□ 0.12
CXCL1P09341 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CXCL1P09341 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CXCL1P09341 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CXCL1P09341 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CXCL1P09341 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CXCL1P09341 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CXCL1P09341 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CXCL1P09341 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC15.79■□□□□ 0.12
CXCL1P09341 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CXCL1P09341 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC15.79■□□□□ 0.12
CXCL1P09341 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CXCL1P09341 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CXCL1P09341 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CXCL1P09341 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CXCL1P09341 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CXCL1P09341 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC15.79■□□□□ 0.12
CXCL1P09341 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
CXCL1P09341 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC15.79■□□□□ 0.12
CXCL1P09341 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
CXCL1P09341 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC15.79■□□□□ 0.12
CXCL1P09341 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CXCL1P09341 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CXCL1P09341 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC15.79■□□□□ 0.12
CXCL1P09341 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
CXCL1P09341 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
CXCL1P09341 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC15.79■□□□□ 0.12
CXCL1P09341 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC15.79■□□□□ 0.12
CXCL1P09341 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC15.79■□□□□ 0.12
CXCL1P09341 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC15.79■□□□□ 0.12
CXCL1P09341 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
CXCL1P09341 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
CXCL1P09341 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC15.78■□□□□ 0.12
CXCL1P09341 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC15.78■□□□□ 0.12
CXCL1P09341 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC15.78■□□□□ 0.12
CXCL1P09341 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
CXCL1P09341 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
CXCL1P09341 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC15.78■□□□□ 0.12
CXCL1P09341 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC15.78■□□□□ 0.12
CXCL1P09341 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
CXCL1P09341 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CXCL1P09341 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
CXCL1P09341 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
CXCL1P09341 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC15.78■□□□□ 0.12
CXCL1P09341 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC15.78■□□□□ 0.12
CXCL1P09341 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CXCL1P09341 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CXCL1P09341 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
CXCL1P09341 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CXCL1P09341 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms