Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CTSDP07339 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC16.93■□□□□ 0.3
CTSDP07339 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CTSDP07339 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CTSDP07339 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CTSDP07339 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CTSDP07339 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CTSDP07339 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CTSDP07339 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CTSDP07339 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CTSDP07339 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CTSDP07339 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CTSDP07339 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CTSDP07339 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CTSDP07339 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC16.92■□□□□ 0.3
CTSDP07339 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC16.92■□□□□ 0.3
CTSDP07339 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC16.92■□□□□ 0.3
CTSDP07339 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC16.92■□□□□ 0.3
CTSDP07339 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC16.92■□□□□ 0.3
CTSDP07339 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC16.92■□□□□ 0.3
CTSDP07339 AC053503.5-201ENST00000601508 636 ntBASIC16.92■□□□□ 0.3
CTSDP07339 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC16.92■□□□□ 0.3
CTSDP07339 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CTSDP07339 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CTSDP07339 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC16.92■□□□□ 0.3
CTSDP07339 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC16.92■□□□□ 0.3
CTSDP07339 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CTSDP07339 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CTSDP07339 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CTSDP07339 AC098818.2-201ENST00000564925 2320 ntBASIC16.91■□□□□ 0.3
CTSDP07339 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CTSDP07339 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC16.91■□□□□ 0.3
CTSDP07339 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC16.91■□□□□ 0.3
CTSDP07339 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CTSDP07339 EEF1DP3-203ENST00000566025 782 ntBASIC16.91■□□□□ 0.3
CTSDP07339 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC16.91■□□□□ 0.3
CTSDP07339 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC16.91■□□□□ 0.3
CTSDP07339 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CTSDP07339 LBX2-AS1-202ENST00000603175 2083 ntBASIC16.91■□□□□ 0.3
CTSDP07339 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CTSDP07339 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CTSDP07339 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC16.91■□□□□ 0.3
CTSDP07339 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CTSDP07339 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CTSDP07339 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CTSDP07339 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC16.91■□□□□ 0.3
CTSDP07339 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CTSDP07339 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC16.91■□□□□ 0.3
CTSDP07339 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CTSDP07339 AL158211.5-201ENST00000623583 2518 ntBASIC16.91■□□□□ 0.3
CTSDP07339 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC16.91■□□□□ 0.3
CTSDP07339 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CTSDP07339 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CTSDP07339 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CTSDP07339 AC061975.6-201ENST00000579045 1553 ntBASIC16.9■□□□□ 0.3
CTSDP07339 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
CTSDP07339 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
CTSDP07339 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CTSDP07339 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC16.9■□□□□ 0.3
CTSDP07339 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CTSDP07339 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
CTSDP07339 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CTSDP07339 PTMA-205ENST00000410064 814 ntTSL 2 BASIC16.9■□□□□ 0.3
CTSDP07339 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC16.9■□□□□ 0.3
CTSDP07339 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CTSDP07339 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CTSDP07339 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CTSDP07339 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CTSDP07339 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CTSDP07339 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CTSDP07339 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
CTSDP07339 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC16.9■□□□□ 0.3
CTSDP07339 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CTSDP07339 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CTSDP07339 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
CTSDP07339 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CTSDP07339 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
CTSDP07339 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC16.89■□□□□ 0.3
CTSDP07339 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CTSDP07339 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CTSDP07339 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
CTSDP07339 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC16.89■□□□□ 0.29
CTSDP07339 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CTSDP07339 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC16.89■□□□□ 0.29
CTSDP07339 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
CTSDP07339 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
CTSDP07339 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CTSDP07339 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CTSDP07339 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CTSDP07339 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
CTSDP07339 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC16.89■□□□□ 0.29
CTSDP07339 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC16.89■□□□□ 0.29
CTSDP07339 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC16.89■□□□□ 0.29
CTSDP07339 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC16.89■□□□□ 0.29
CTSDP07339 IGHV3-19-201ENST00000521488 291 ntBASIC16.89■□□□□ 0.29
CTSDP07339 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC16.89■□□□□ 0.29
CTSDP07339 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CTSDP07339 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
CTSDP07339 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CTSDP07339 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms