Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
COL5A2P05997 KRT16P5-201ENST00000455284 522 ntBASIC27.18■■□□□ 1.94
COL5A2P05997 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC27.18■■□□□ 1.94
COL5A2P05997 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC27.18■■□□□ 1.94
COL5A2P05997 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
COL5A2P05997 AL121829.2-201ENST00000620908 328 ntBASIC27.18■■□□□ 1.94
COL5A2P05997 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
COL5A2P05997 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC27.18■■□□□ 1.94
COL5A2P05997 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
COL5A2P05997 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
COL5A2P05997 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC27.17■■□□□ 1.94
COL5A2P05997 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
COL5A2P05997 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC27.17■■□□□ 1.94
COL5A2P05997 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
COL5A2P05997 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
COL5A2P05997 AL353807.1-201ENST00000427475 662 ntBASIC27.17■■□□□ 1.94
COL5A2P05997 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
COL5A2P05997 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC27.17■■□□□ 1.94
COL5A2P05997 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC27.17■■□□□ 1.94
COL5A2P05997 SRI-203ENST00000419179 1307 ntTSL 2 BASIC27.17■■□□□ 1.94
COL5A2P05997 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC27.16■■□□□ 1.94
COL5A2P05997 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC27.16■■□□□ 1.94
COL5A2P05997 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC27.16■■□□□ 1.94
COL5A2P05997 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC27.16■■□□□ 1.94
COL5A2P05997 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
COL5A2P05997 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
COL5A2P05997 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC27.15■■□□□ 1.94
COL5A2P05997 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
COL5A2P05997 AL355355.2-201ENST00000442321 338 ntBASIC27.15■■□□□ 1.94
COL5A2P05997 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC27.15■■□□□ 1.94
COL5A2P05997 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC27.15■■□□□ 1.94
COL5A2P05997 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC27.15■■□□□ 1.94
COL5A2P05997 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC27.15■■□□□ 1.94
COL5A2P05997 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC27.15■■□□□ 1.94
COL5A2P05997 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
COL5A2P05997 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
COL5A2P05997 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
COL5A2P05997 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC27.14■■□□□ 1.94
COL5A2P05997 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
COL5A2P05997 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
COL5A2P05997 FAM197Y1-201ENST00000421178 764 ntBASIC27.14■■□□□ 1.94
COL5A2P05997 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC27.14■■□□□ 1.94
COL5A2P05997 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
COL5A2P05997 RBM17P1-201ENST00000453646 1190 ntBASIC27.14■■□□□ 1.94
COL5A2P05997 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC27.14■■□□□ 1.94
COL5A2P05997 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
COL5A2P05997 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC27.14■■□□□ 1.94
COL5A2P05997 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC27.14■■□□□ 1.93
COL5A2P05997 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC27.14■■□□□ 1.93
COL5A2P05997 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC27.14■■□□□ 1.93
COL5A2P05997 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC27.14■■□□□ 1.93
COL5A2P05997 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC27.14■■□□□ 1.93
COL5A2P05997 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC27.14■■□□□ 1.93
COL5A2P05997 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC27.13■■□□□ 1.93
COL5A2P05997 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC27.13■■□□□ 1.93
COL5A2P05997 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC27.13■■□□□ 1.93
COL5A2P05997 FDX2-207ENST00000494368 584 ntTSL 4 BASIC27.13■■□□□ 1.93
COL5A2P05997 NUDT16P1-203ENST00000513809 620 ntBASIC27.13■■□□□ 1.93
COL5A2P05997 NT5C-211ENST00000582170 653 ntTSL 3 BASIC27.13■■□□□ 1.93
COL5A2P05997 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC27.13■■□□□ 1.93
COL5A2P05997 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
COL5A2P05997 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
COL5A2P05997 AC124283.5-201ENST00000624661 1809 ntBASIC27.13■■□□□ 1.93
COL5A2P05997 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC27.13■■□□□ 1.93
COL5A2P05997 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
COL5A2P05997 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC27.13■■□□□ 1.93
COL5A2P05997 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
COL5A2P05997 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC27.13■■□□□ 1.93
COL5A2P05997 DECR2-212ENST00000627716 352 ntTSL 2 BASIC27.13■■□□□ 1.93
COL5A2P05997 AC079598.2-202ENST00000546624 1451 ntBASIC27.12■■□□□ 1.93
COL5A2P05997 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
COL5A2P05997 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC27.12■■□□□ 1.93
COL5A2P05997 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
COL5A2P05997 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
COL5A2P05997 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC27.12■■□□□ 1.93
COL5A2P05997 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC27.12■■□□□ 1.93
COL5A2P05997 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC27.12■■□□□ 1.93
COL5A2P05997 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC27.12■■□□□ 1.93
COL5A2P05997 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC27.12■■□□□ 1.93
COL5A2P05997 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC27.12■■□□□ 1.93
COL5A2P05997 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC27.12■■□□□ 1.93
COL5A2P05997 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC27.12■■□□□ 1.93
COL5A2P05997 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC27.12■■□□□ 1.93
COL5A2P05997 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
COL5A2P05997 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
COL5A2P05997 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC27.11■■□□□ 1.93
COL5A2P05997 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC27.11■■□□□ 1.93
COL5A2P05997 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC27.11■■□□□ 1.93
COL5A2P05997 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
COL5A2P05997 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC27.11■■□□□ 1.93
COL5A2P05997 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
COL5A2P05997 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
COL5A2P05997 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC27.11■■□□□ 1.93
COL5A2P05997 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
COL5A2P05997 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC27.11■■□□□ 1.93
COL5A2P05997 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
COL5A2P05997 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC27.11■■□□□ 1.93
COL5A2P05997 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC27.11■■□□□ 1.93
COL5A2P05997 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC27.11■■□□□ 1.93
COL5A2P05997 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC27.11■■□□□ 1.93
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms