Protein–RNA interactions for Protein: P05318

RPP1A, 60S acidic ribosomal protein P1-alpha, yeastyeast

Predicted RBP Predictions only

Length 106 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPP1AP05318 SEG1YMR086W 2883 nt3.62□□□□□ -1.83
RPP1AP05318 TFB1YDR311W 1929 nt3.62□□□□□ -1.83
RPP1AP05318 NUP159YIL115C 4383 nt3.61□□□□□ -1.83
RPP1AP05318 SWH1YAR042W 3567 nt3.61□□□□□ -1.83
RPP1AP05318 LDS2YOL047C 1071 nt3.61□□□□□ -1.83
RPP1AP05318 YGL069CYGL069C 465 nt3.6□□□□□ -1.83
RPP1AP05318 IGO2YHR132W-A 396 nt3.6□□□□□ -1.83
RPP1AP05318 SWI3YJL176C 2478 nt3.6□□□□□ -1.83
RPP1AP05318 APL4YPR029C 2499 nt3.59□□□□□ -1.83
RPP1AP05318 YIL165CYIL165C 360 nt3.59□□□□□ -1.83
RPP1AP05318 RPS23BYPR132W 438 nt3.59□□□□□ -1.83
RPP1AP05318 SWA2YDR320C 2007 nt3.59□□□□□ -1.83
RPP1AP05318 PDE2YOR360C 1581 nt3.59□□□□□ -1.84
RPP1AP05318 NCR1YPL006W 3513 nt3.58□□□□□ -1.84
RPP1AP05318 PFK26YIL107C 2484 nt3.58□□□□□ -1.84
RPP1AP05318 YGL074CYGL074C 327 nt3.58□□□□□ -1.84
RPP1AP05318 RDN5-1RDN5-1 121 nt3.58□□□□□ -1.84
RPP1AP05318 RDN5-6RDN5-6 121 nt3.58□□□□□ -1.84
RPP1AP05318 RPL38YLR325C 237 nt3.58□□□□□ -1.84
RPP1AP05318 YMR105W-AYMR105W-A 195 nt3.58□□□□□ -1.84
RPP1AP05318 YBR182C-AYBR182C-A 195 nt3.58□□□□□ -1.84
RPP1AP05318 ZDS1YMR273C 2748 nt3.58□□□□□ -1.84
RPP1AP05318 SPT6YGR116W 4356 nt3.58□□□□□ -1.84
RPP1AP05318 LCD1YDR499W 2244 nt3.58□□□□□ -1.84
RPP1AP05318 YDR246W-AYDR246W-A 201 nt3.57□□□□□ -1.84
RPP1AP05318 GEP4YHR100C 558 nt3.57□□□□□ -1.84
RPP1AP05318 YIR030W-AYIR030W-A 384 nt3.57□□□□□ -1.84
RPP1AP05318 YLR154W-BYLR154W-B 165 nt3.57□□□□□ -1.84
RPP1AP05318 BNI4YNL233W 2679 nt3.57□□□□□ -1.84
RPP1AP05318 YPR092WYPR092W 306 nt3.57□□□□□ -1.84
RPP1AP05318 STU1YBL034C 4542 nt3.57□□□□□ -1.84
RPP1AP05318 HSC82YMR186W 2118 nt3.56□□□□□ -1.84
RPP1AP05318 YEL032C-AYEL032C-A 162 nt3.56□□□□□ -1.84
RPP1AP05318 YLR255CYLR255C 354 nt3.56□□□□□ -1.84
RPP1AP05318 YLR416CYLR416C 399 nt3.56□□□□□ -1.84
RPP1AP05318 CDC27YBL084C 2277 nt3.56□□□□□ -1.84
RPP1AP05318 GCD6YDR211W 2139 nt3.56□□□□□ -1.84
RPP1AP05318 YLL007CYLL007C 1998 nt3.56□□□□□ -1.84
RPP1AP05318 SPB1YCL054W 2526 nt3.55□□□□□ -1.84
RPP1AP05318 PRP42YDR235W 1635 nt3.55□□□□□ -1.84
RPP1AP05318 YDR193WYDR193W 399 nt3.55□□□□□ -1.84
RPP1AP05318 LSO2YGR169C-A 279 nt3.55□□□□□ -1.84
RPP1AP05318 MYO3YKL129C 3819 nt3.55□□□□□ -1.84
RPP1AP05318 YPR002C-AYPR002C-A 198 nt3.55□□□□□ -1.84
RPP1AP05318 TIM12YBR091C 330 nt3.55□□□□□ -1.84
RPP1AP05318 SEC5YDR166C 2916 nt3.54□□□□□ -1.84
RPP1AP05318 YGL036WYGL036W 2730 nt3.54□□□□□ -1.84
RPP1AP05318 NUP120YKL057C 3114 nt3.54□□□□□ -1.84
RPP1AP05318 MNN4YKL201C 3537 nt3.54□□□□□ -1.84
RPP1AP05318 NMA111YNL123W 2994 nt3.54□□□□□ -1.84
RPP1AP05318 CAF130YGR134W 3369 nt3.54□□□□□ -1.84
RPP1AP05318 ECM16YMR128W 3804 nt3.53□□□□□ -1.84
RPP1AP05318 YDR544CYDR544C 429 nt3.53□□□□□ -1.84
RPP1AP05318 ERP6YGL002W 651 nt3.53□□□□□ -1.84
RPP1AP05318 YHR210CYHR210C 1026 nt3.53□□□□□ -1.84
RPP1AP05318 TAF6YGL112C 1551 nt3.53□□□□□ -1.84
RPP1AP05318 POL1YNL102W 4407 nt3.53□□□□□ -1.84
RPP1AP05318 YCG1YDR325W 3108 nt3.53□□□□□ -1.85
RPP1AP05318 SLM2YNL047C 1971 nt3.52□□□□□ -1.85
RPP1AP05318 RPS17BYDR447C 411 nt3.52□□□□□ -1.85
RPP1AP05318 PEX8YGR077C 1770 nt3.52□□□□□ -1.85
RPP1AP05318 RAD26YJR035W 3258 nt3.52□□□□□ -1.85
RPP1AP05318 VPS54YDR027C 2670 nt3.52□□□□□ -1.85
RPP1AP05318 HEF3YNL014W 3135 nt3.52□□□□□ -1.85
RPP1AP05318 MUK1YPL070W 1839 nt3.51□□□□□ -1.85
RPP1AP05318 SIP3YNL257C 3690 nt3.51□□□□□ -1.85
RPP1AP05318 YML007C-AYML007C-A 111 nt3.51□□□□□ -1.85
RPP1AP05318 YOR161W-BYOR161W-B 261 nt3.51□□□□□ -1.85
RPP1AP05318 NUT2YPR168W 474 nt3.51□□□□□ -1.85
RPP1AP05318 NPR1YNL183C 2373 nt3.5□□□□□ -1.85
RPP1AP05318 SNC2YOR327C 348 nt3.5□□□□□ -1.85
RPP1AP05318 KAR3YPR141C 2190 nt3.5□□□□□ -1.85
RPP1AP05318 YJL070CYJL070C 2667 nt3.49□□□□□ -1.85
RPP1AP05318 LEU3YLR451W 2661 nt3.49□□□□□ -1.85
RPP1AP05318 YDR464C-AYDR464C-A 189 nt3.49□□□□□ -1.85
RPP1AP05318 PRE4YFR050C 801 nt3.49□□□□□ -1.85
RPP1AP05318 YLR012CYLR012C 300 nt3.49□□□□□ -1.85
RPP1AP05318 YML037CYML037C 1023 nt3.49□□□□□ -1.85
RPP1AP05318 CCM1YGR150C 2595 nt3.49□□□□□ -1.85
RPP1AP05318 ASG1YIL130W 2895 nt3.48□□□□□ -1.85
RPP1AP05318 RPL25YOL127W 429 nt3.48□□□□□ -1.85
RPP1AP05318 MTC4YBR255W 2085 nt3.48□□□□□ -1.85
RPP1AP05318 21S_rRNA21S_rRNA 3296 nt3.48□□□□□ -1.85
RPP1AP05318 PWP2YCR057C 2772 nt3.47□□□□□ -1.85
RPP1AP05318 TOP1YOL006C 2310 nt3.47□□□□□ -1.85
RPP1AP05318 TFB5YDR079C-A 219 nt3.47□□□□□ -1.85
RPP1AP05318 SPT4YGR063C 309 nt3.47□□□□□ -1.85
RPP1AP05318 SGF11YPL047W 300 nt3.47□□□□□ -1.85
RPP1AP05318 FLO10YKR102W 3510 nt3.47□□□□□ -1.85
RPP1AP05318 MSR1YHR091C 1932 nt3.46□□□□□ -1.85
RPP1AP05318 TRM2YKR056W 1920 nt3.46□□□□□ -1.85
RPP1AP05318 APE2YKL157W 2859 nt3.46□□□□□ -1.85
RPP1AP05318 SPA2YLL021W 4401 nt3.46□□□□□ -1.86
RPP1AP05318 PMP1YCR024C-A 123 nt3.46□□□□□ -1.86
RPP1AP05318 YDR286CYDR286C 345 nt3.46□□□□□ -1.86
RPP1AP05318 MRPL39YML009C 213 nt3.46□□□□□ -1.86
RPP1AP05318 FPR1YNL135C 345 nt3.46□□□□□ -1.86
RPP1AP05318 RSC1YGR056W 2787 nt3.46□□□□□ -1.86
RPP1AP05318 COG3YER157W 2406 nt3.45□□□□□ -1.86
RPP1AP05318 PSF1YDR013W 627 nt3.45□□□□□ -1.86
Retrieved 100 of 7,029 protein–RNA pairs in 32.5 ms