Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC24.63■■□□□ 1.53
CHGBP05060 BID-203ENST00000399765 1879 ntTSL 2 BASIC24.63■■□□□ 1.53
CHGBP05060 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
CHGBP05060 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC24.63■■□□□ 1.53
CHGBP05060 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
CHGBP05060 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC24.63■■□□□ 1.53
CHGBP05060 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
CHGBP05060 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
CHGBP05060 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC24.62■■□□□ 1.53
CHGBP05060 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC24.62■■□□□ 1.53
CHGBP05060 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC24.62■■□□□ 1.53
CHGBP05060 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC24.62■■□□□ 1.53
CHGBP05060 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
CHGBP05060 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
CHGBP05060 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC24.62■■□□□ 1.53
CHGBP05060 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC24.62■■□□□ 1.53
CHGBP05060 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC24.62■■□□□ 1.53
CHGBP05060 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC24.62■■□□□ 1.53
CHGBP05060 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC24.62■■□□□ 1.53
CHGBP05060 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC24.62■■□□□ 1.53
CHGBP05060 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC24.62■■□□□ 1.53
CHGBP05060 AC007225.1-201ENST00000566331 1836 ntBASIC24.62■■□□□ 1.53
CHGBP05060 ME2-216ENST00000639850 2331 ntTSL 5 BASIC24.62■■□□□ 1.53
CHGBP05060 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
CHGBP05060 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
CHGBP05060 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC24.62■■□□□ 1.53
CHGBP05060 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
CHGBP05060 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
CHGBP05060 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC24.61■■□□□ 1.53
CHGBP05060 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC24.61■■□□□ 1.53
CHGBP05060 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
CHGBP05060 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
CHGBP05060 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
CHGBP05060 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC24.61■■□□□ 1.53
CHGBP05060 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC24.61■■□□□ 1.53
CHGBP05060 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC24.61■■□□□ 1.53
CHGBP05060 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
CHGBP05060 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
CHGBP05060 AC105020.6-201ENST00000621523 1217 ntBASIC24.61■■□□□ 1.53
CHGBP05060 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
CHGBP05060 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC24.61■■□□□ 1.53
CHGBP05060 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC24.61■■□□□ 1.53
CHGBP05060 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
CHGBP05060 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
CHGBP05060 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
CHGBP05060 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
CHGBP05060 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
CHGBP05060 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
CHGBP05060 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC24.6■■□□□ 1.53
CHGBP05060 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC24.6■■□□□ 1.53
CHGBP05060 LSM12P1-201ENST00000411836 588 ntBASIC24.6■■□□□ 1.53
CHGBP05060 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC24.6■■□□□ 1.53
CHGBP05060 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC24.6■■□□□ 1.53
CHGBP05060 MIR4758-201ENST00000577688 71 ntBASIC24.6■■□□□ 1.53
CHGBP05060 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
CHGBP05060 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC24.6■■□□□ 1.53
CHGBP05060 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC24.6■■□□□ 1.53
CHGBP05060 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
CHGBP05060 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC24.59■■□□□ 1.53
CHGBP05060 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC24.59■■□□□ 1.53
CHGBP05060 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC24.59■■□□□ 1.53
CHGBP05060 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC24.59■■□□□ 1.53
CHGBP05060 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
CHGBP05060 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
CHGBP05060 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
CHGBP05060 AC073210.2-201ENST00000430369 194 ntBASIC24.59■■□□□ 1.53
CHGBP05060 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
CHGBP05060 AL356652.1-201ENST00000615962 565 ntBASIC24.59■■□□□ 1.53
CHGBP05060 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC24.59■■□□□ 1.53
CHGBP05060 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC24.59■■□□□ 1.53
CHGBP05060 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC24.59■■□□□ 1.53
CHGBP05060 AC092667.1-201ENST00000434301 2586 ntBASIC24.59■■□□□ 1.53
CHGBP05060 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
CHGBP05060 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
CHGBP05060 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
CHGBP05060 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC24.58■■□□□ 1.53
CHGBP05060 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC24.58■■□□□ 1.53
CHGBP05060 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
CHGBP05060 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
CHGBP05060 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
CHGBP05060 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC24.58■■□□□ 1.53
CHGBP05060 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC24.58■■□□□ 1.53
CHGBP05060 RHEB-204ENST00000472642 900 ntTSL 3 BASIC24.58■■□□□ 1.53
CHGBP05060 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC24.58■■□□□ 1.53
CHGBP05060 AC133041.1-202ENST00000642053 222 ntBASIC24.58■■□□□ 1.53
CHGBP05060 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
CHGBP05060 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
CHGBP05060 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC24.58■■□□□ 1.53
CHGBP05060 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
CHGBP05060 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
CHGBP05060 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC24.58■■□□□ 1.52
CHGBP05060 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC24.58■■□□□ 1.52
CHGBP05060 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC24.57■■□□□ 1.52
CHGBP05060 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC24.57■■□□□ 1.52
CHGBP05060 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
CHGBP05060 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC24.57■■□□□ 1.52
CHGBP05060 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC24.57■■□□□ 1.52
CHGBP05060 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC24.57■■□□□ 1.52
CHGBP05060 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC24.57■■□□□ 1.52
CHGBP05060 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms