Protein–RNA interactions for Protein: P05023

ATP1A1, Sodium/potassium-transporting ATPase subunit alpha-1, humanhuman

Known RBP Predictions only

Length 1,023 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1A1P05023 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
ATP1A1P05023 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
ATP1A1P05023 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC21.7■■□□□ 1.06
ATP1A1P05023 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
ATP1A1P05023 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
ATP1A1P05023 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
ATP1A1P05023 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC21.7■■□□□ 1.06
ATP1A1P05023 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
ATP1A1P05023 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
ATP1A1P05023 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
ATP1A1P05023 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
ATP1A1P05023 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
ATP1A1P05023 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
ATP1A1P05023 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
ATP1A1P05023 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ATP1A1P05023 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC21.69■■□□□ 1.06
ATP1A1P05023 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ATP1A1P05023 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ATP1A1P05023 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC21.69■■□□□ 1.06
ATP1A1P05023 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC21.69■■□□□ 1.06
ATP1A1P05023 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ATP1A1P05023 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ATP1A1P05023 AC098818.2-201ENST00000564925 2320 ntBASIC21.69■■□□□ 1.06
ATP1A1P05023 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
ATP1A1P05023 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC21.69■■□□□ 1.06
ATP1A1P05023 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ATP1A1P05023 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC21.69■■□□□ 1.06
ATP1A1P05023 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ATP1A1P05023 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC21.69■■□□□ 1.06
ATP1A1P05023 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC21.68■■□□□ 1.06
ATP1A1P05023 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ATP1A1P05023 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
ATP1A1P05023 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC21.68■■□□□ 1.06
ATP1A1P05023 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ATP1A1P05023 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ATP1A1P05023 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ATP1A1P05023 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC21.68■■□□□ 1.06
ATP1A1P05023 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC21.68■■□□□ 1.06
ATP1A1P05023 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC21.68■■□□□ 1.06
ATP1A1P05023 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC21.68■■□□□ 1.06
ATP1A1P05023 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ATP1A1P05023 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
ATP1A1P05023 AC018445.3-201ENST00000624177 1945 ntBASIC21.68■■□□□ 1.06
ATP1A1P05023 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
ATP1A1P05023 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ATP1A1P05023 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
ATP1A1P05023 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
ATP1A1P05023 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
ATP1A1P05023 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ATP1A1P05023 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
ATP1A1P05023 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
ATP1A1P05023 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
ATP1A1P05023 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
ATP1A1P05023 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC21.67■■□□□ 1.06
ATP1A1P05023 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
ATP1A1P05023 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
ATP1A1P05023 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
ATP1A1P05023 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
ATP1A1P05023 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
ATP1A1P05023 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
ATP1A1P05023 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
ATP1A1P05023 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
ATP1A1P05023 AP004607.4-201ENST00000530158 1459 ntBASIC21.67■■□□□ 1.06
ATP1A1P05023 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
ATP1A1P05023 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC21.67■■□□□ 1.06
ATP1A1P05023 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC21.67■■□□□ 1.06
ATP1A1P05023 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
ATP1A1P05023 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
ATP1A1P05023 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
ATP1A1P05023 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
ATP1A1P05023 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
ATP1A1P05023 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
ATP1A1P05023 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
ATP1A1P05023 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
ATP1A1P05023 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
ATP1A1P05023 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC21.66■■□□□ 1.06
ATP1A1P05023 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC21.66■■□□□ 1.06
ATP1A1P05023 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC21.66■■□□□ 1.06
ATP1A1P05023 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
ATP1A1P05023 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
ATP1A1P05023 EEF1DP3-203ENST00000566025 782 ntBASIC21.66■■□□□ 1.06
ATP1A1P05023 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC21.66■■□□□ 1.06
ATP1A1P05023 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC21.66■■□□□ 1.06
ATP1A1P05023 LBX2-AS1-202ENST00000603175 2083 ntBASIC21.66■■□□□ 1.06
ATP1A1P05023 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
ATP1A1P05023 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
ATP1A1P05023 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
ATP1A1P05023 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
ATP1A1P05023 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ATP1A1P05023 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC21.65■■□□□ 1.06
ATP1A1P05023 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ATP1A1P05023 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
ATP1A1P05023 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC21.65■■□□□ 1.06
ATP1A1P05023 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC21.65■■□□□ 1.06
ATP1A1P05023 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
ATP1A1P05023 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
ATP1A1P05023 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ATP1A1P05023 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ATP1A1P05023 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
ATP1A1P05023 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC21.65■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms