Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.76■□□□□ 0.91
MT-ND3P03897 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.76■□□□□ 0.91
MT-ND3P03897 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
MT-ND3P03897 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.75■□□□□ 0.91
MT-ND3P03897 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
MT-ND3P03897 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
MT-ND3P03897 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
MT-ND3P03897 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
MT-ND3P03897 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC20.75■□□□□ 0.91
MT-ND3P03897 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC20.75■□□□□ 0.91
MT-ND3P03897 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
MT-ND3P03897 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
MT-ND3P03897 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
MT-ND3P03897 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
MT-ND3P03897 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
MT-ND3P03897 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
MT-ND3P03897 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
MT-ND3P03897 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.74■□□□□ 0.91
MT-ND3P03897 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
MT-ND3P03897 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.74■□□□□ 0.91
MT-ND3P03897 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
MT-ND3P03897 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
MT-ND3P03897 AL512408.1-201ENST00000569378 2000 ntBASIC20.74■□□□□ 0.91
MT-ND3P03897 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC20.74■□□□□ 0.91
MT-ND3P03897 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.74■□□□□ 0.91
MT-ND3P03897 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
MT-ND3P03897 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
MT-ND3P03897 AL162377.1-201ENST00000618844 1793 ntBASIC20.74■□□□□ 0.91
MT-ND3P03897 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
MT-ND3P03897 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
MT-ND3P03897 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
MT-ND3P03897 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
MT-ND3P03897 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
MT-ND3P03897 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
MT-ND3P03897 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
MT-ND3P03897 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
MT-ND3P03897 AC112907.3-201ENST00000577781 2400 ntBASIC20.73■□□□□ 0.91
MT-ND3P03897 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
MT-ND3P03897 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
MT-ND3P03897 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
MT-ND3P03897 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.73■□□□□ 0.91
MT-ND3P03897 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
MT-ND3P03897 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
MT-ND3P03897 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
MT-ND3P03897 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
MT-ND3P03897 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.73■□□□□ 0.91
MT-ND3P03897 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
MT-ND3P03897 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
MT-ND3P03897 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
MT-ND3P03897 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
MT-ND3P03897 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.72■□□□□ 0.91
MT-ND3P03897 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
MT-ND3P03897 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
MT-ND3P03897 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
MT-ND3P03897 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
MT-ND3P03897 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
MT-ND3P03897 AC004911.1-201ENST00000416316 871 ntBASIC20.72■□□□□ 0.91
MT-ND3P03897 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC20.72■□□□□ 0.91
MT-ND3P03897 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC20.72■□□□□ 0.91
MT-ND3P03897 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC20.72■□□□□ 0.91
MT-ND3P03897 AC092437.1-201ENST00000624794 1048 ntBASIC20.72■□□□□ 0.91
MT-ND3P03897 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC20.72■□□□□ 0.91
MT-ND3P03897 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
MT-ND3P03897 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
MT-ND3P03897 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC20.72■□□□□ 0.91
MT-ND3P03897 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
MT-ND3P03897 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.72■□□□□ 0.91
MT-ND3P03897 BX005040.4-201ENST00000637145 1518 ntBASIC20.72■□□□□ 0.91
MT-ND3P03897 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.72■□□□□ 0.91
MT-ND3P03897 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
MT-ND3P03897 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.72■□□□□ 0.91
MT-ND3P03897 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
MT-ND3P03897 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
MT-ND3P03897 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
MT-ND3P03897 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
MT-ND3P03897 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
MT-ND3P03897 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC20.71■□□□□ 0.91
MT-ND3P03897 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC20.71■□□□□ 0.91
MT-ND3P03897 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.71■□□□□ 0.91
MT-ND3P03897 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
MT-ND3P03897 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.71■□□□□ 0.91
MT-ND3P03897 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC20.71■□□□□ 0.91
MT-ND3P03897 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC20.71■□□□□ 0.91
MT-ND3P03897 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC20.71■□□□□ 0.91
MT-ND3P03897 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.71■□□□□ 0.91
MT-ND3P03897 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.71■□□□□ 0.91
MT-ND3P03897 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
MT-ND3P03897 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.71■□□□□ 0.91
MT-ND3P03897 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
MT-ND3P03897 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
MT-ND3P03897 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
MT-ND3P03897 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
MT-ND3P03897 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.7■□□□□ 0.9
MT-ND3P03897 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
MT-ND3P03897 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC20.7■□□□□ 0.9
MT-ND3P03897 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC20.7■□□□□ 0.9
MT-ND3P03897 TPRG1LP1-201ENST00000598702 760 ntBASIC20.7■□□□□ 0.9
MT-ND3P03897 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
MT-ND3P03897 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.7■□□□□ 0.9
MT-ND3P03897 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms