Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
TOP3BO95985 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
TOP3BO95985 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TOP3BO95985 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TOP3BO95985 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.86■□□□□ 0.93
TOP3BO95985 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TOP3BO95985 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TOP3BO95985 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
TOP3BO95985 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TOP3BO95985 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.86■□□□□ 0.93
TOP3BO95985 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TOP3BO95985 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TOP3BO95985 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TOP3BO95985 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
TOP3BO95985 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TOP3BO95985 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TOP3BO95985 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TOP3BO95985 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
TOP3BO95985 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.85■□□□□ 0.93
TOP3BO95985 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TOP3BO95985 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TOP3BO95985 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC20.85■□□□□ 0.93
TOP3BO95985 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
TOP3BO95985 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
TOP3BO95985 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TOP3BO95985 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TOP3BO95985 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.85■□□□□ 0.93
TOP3BO95985 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.85■□□□□ 0.93
TOP3BO95985 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TOP3BO95985 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TOP3BO95985 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TOP3BO95985 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.85■□□□□ 0.93
TOP3BO95985 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.84■□□□□ 0.93
TOP3BO95985 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
TOP3BO95985 BAALC-201ENST00000297574 801 ntTSL 3 BASIC20.84■□□□□ 0.93
TOP3BO95985 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC20.84■□□□□ 0.93
TOP3BO95985 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TOP3BO95985 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.84■□□□□ 0.93
TOP3BO95985 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TOP3BO95985 AC006058.3-201ENST00000606217 1069 ntBASIC20.84■□□□□ 0.93
TOP3BO95985 AC092118.2-201ENST00000613495 667 ntBASIC20.84■□□□□ 0.93
TOP3BO95985 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.84■□□□□ 0.93
TOP3BO95985 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TOP3BO95985 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
TOP3BO95985 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TOP3BO95985 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
TOP3BO95985 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
TOP3BO95985 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
TOP3BO95985 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TOP3BO95985 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
TOP3BO95985 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC20.83■□□□□ 0.93
TOP3BO95985 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TOP3BO95985 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TOP3BO95985 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC20.83■□□□□ 0.93
TOP3BO95985 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
TOP3BO95985 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
TOP3BO95985 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
TOP3BO95985 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.83■□□□□ 0.92
TOP3BO95985 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
TOP3BO95985 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
TOP3BO95985 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.92
TOP3BO95985 MKRN4P-201ENST00000444706 1521 ntBASIC20.83■□□□□ 0.92
TOP3BO95985 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
TOP3BO95985 AC005224.4-201ENST00000583262 1652 ntBASIC20.83■□□□□ 0.92
TOP3BO95985 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
TOP3BO95985 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TOP3BO95985 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
TOP3BO95985 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TOP3BO95985 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
TOP3BO95985 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC20.82■□□□□ 0.92
TOP3BO95985 ECEL1P3-201ENST00000427961 737 ntBASIC20.82■□□□□ 0.92
TOP3BO95985 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TOP3BO95985 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC20.82■□□□□ 0.92
TOP3BO95985 AC128676.1-201ENST00000454392 318 ntBASIC20.82■□□□□ 0.92
TOP3BO95985 UNC93B4-201ENST00000505679 747 ntBASIC20.82■□□□□ 0.92
TOP3BO95985 AC083880.1-201ENST00000608266 535 ntBASIC20.82■□□□□ 0.92
TOP3BO95985 AC010536.3-201ENST00000620306 533 ntBASIC20.82■□□□□ 0.92
TOP3BO95985 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.82■□□□□ 0.92
TOP3BO95985 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TOP3BO95985 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TOP3BO95985 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
TOP3BO95985 AC006128.1-201ENST00000624704 1661 ntBASIC20.82■□□□□ 0.92
TOP3BO95985 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TOP3BO95985 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TOP3BO95985 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TOP3BO95985 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
TOP3BO95985 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TOP3BO95985 AP005212.1-201ENST00000581547 1997 ntBASIC20.81■□□□□ 0.92
TOP3BO95985 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.81■□□□□ 0.92
TOP3BO95985 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TOP3BO95985 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.81■□□□□ 0.92
TOP3BO95985 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
TOP3BO95985 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
TOP3BO95985 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
TOP3BO95985 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
TOP3BO95985 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC20.81■□□□□ 0.92
TOP3BO95985 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.81■□□□□ 0.92
TOP3BO95985 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC20.81■□□□□ 0.92
TOP3BO95985 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC20.81■□□□□ 0.92
TOP3BO95985 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms