Protein–RNA interactions for Protein: O95219

SNX4, Sorting nexin-4, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4O95219 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SNX4O95219 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
SNX4O95219 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SNX4O95219 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SNX4O95219 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.11■□□□□ 0.65
SNX4O95219 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SNX4O95219 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.11■□□□□ 0.65
SNX4O95219 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SNX4O95219 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SNX4O95219 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC19.11■□□□□ 0.65
SNX4O95219 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
SNX4O95219 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
SNX4O95219 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
SNX4O95219 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC19.11■□□□□ 0.65
SNX4O95219 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19.11■□□□□ 0.65
SNX4O95219 AC243732.1-201ENST00000612648 864 ntBASIC19.11■□□□□ 0.65
SNX4O95219 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.11■□□□□ 0.65
SNX4O95219 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SNX4O95219 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SNX4O95219 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SNX4O95219 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.11■□□□□ 0.65
SNX4O95219 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SNX4O95219 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
SNX4O95219 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.11■□□□□ 0.65
SNX4O95219 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SNX4O95219 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.11■□□□□ 0.65
SNX4O95219 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.11■□□□□ 0.65
SNX4O95219 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.1■□□□□ 0.65
SNX4O95219 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SNX4O95219 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.1■□□□□ 0.65
SNX4O95219 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SNX4O95219 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SNX4O95219 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC19.1■□□□□ 0.65
SNX4O95219 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SNX4O95219 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
SNX4O95219 Z98882.1-201ENST00000622160 2253 ntBASIC19.1■□□□□ 0.65
SNX4O95219 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SNX4O95219 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SNX4O95219 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.1■□□□□ 0.65
SNX4O95219 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.1■□□□□ 0.65
SNX4O95219 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SNX4O95219 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.1■□□□□ 0.65
SNX4O95219 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.09■□□□□ 0.65
SNX4O95219 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.09■□□□□ 0.65
SNX4O95219 RBM17P2-201ENST00000616397 1405 ntBASIC19.09■□□□□ 0.65
SNX4O95219 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SNX4O95219 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SNX4O95219 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
SNX4O95219 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC19.09■□□□□ 0.65
SNX4O95219 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.09■□□□□ 0.65
SNX4O95219 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SNX4O95219 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SNX4O95219 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.09■□□□□ 0.65
SNX4O95219 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SNX4O95219 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SNX4O95219 BMP1-204ENST00000397814 836 ntTSL 4 BASIC19.09■□□□□ 0.65
SNX4O95219 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SNX4O95219 AC006970.2-201ENST00000450065 779 ntBASIC19.09■□□□□ 0.65
SNX4O95219 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC19.09■□□□□ 0.65
SNX4O95219 AC007322.4-201ENST00000509611 723 ntBASIC19.09■□□□□ 0.65
SNX4O95219 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SNX4O95219 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
SNX4O95219 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.09■□□□□ 0.65
SNX4O95219 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
SNX4O95219 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.09■□□□□ 0.65
SNX4O95219 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
SNX4O95219 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC19.08■□□□□ 0.65
SNX4O95219 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
SNX4O95219 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
SNX4O95219 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
SNX4O95219 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SNX4O95219 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SNX4O95219 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SNX4O95219 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SNX4O95219 CNN2P6-201ENST00000439038 900 ntBASIC19.08■□□□□ 0.64
SNX4O95219 AC245052.3-201ENST00000450182 901 ntBASIC19.08■□□□□ 0.64
SNX4O95219 TK2-208ENST00000545043 1120 ntTSL 2 BASIC19.08■□□□□ 0.64
SNX4O95219 AC005181.1-201ENST00000604782 1256 ntBASIC19.08■□□□□ 0.64
SNX4O95219 MAZ-216ENST00000616501 991 ntTSL 5 BASIC19.08■□□□□ 0.64
SNX4O95219 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
SNX4O95219 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.08■□□□□ 0.64
SNX4O95219 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.08■□□□□ 0.64
SNX4O95219 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SNX4O95219 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.08■□□□□ 0.64
SNX4O95219 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SNX4O95219 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.07■□□□□ 0.64
SNX4O95219 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.07■□□□□ 0.64
SNX4O95219 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SNX4O95219 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SNX4O95219 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
SNX4O95219 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC19.07■□□□□ 0.64
SNX4O95219 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
SNX4O95219 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC19.07■□□□□ 0.64
SNX4O95219 CROCCP5-201ENST00000436658 830 ntBASIC19.07■□□□□ 0.64
SNX4O95219 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC19.07■□□□□ 0.64
SNX4O95219 PPP1R14BP3-201ENST00000509033 445 ntBASIC19.07■□□□□ 0.64
SNX4O95219 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SNX4O95219 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.07■□□□□ 0.64
SNX4O95219 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SNX4O95219 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms