Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
RTN3O95197 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RTN3O95197 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RTN3O95197 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
RTN3O95197 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RTN3O95197 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
RTN3O95197 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC21.52■■□□□ 1.04
RTN3O95197 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC21.52■■□□□ 1.04
RTN3O95197 NME6-213ENST00000451657 871 ntTSL 2 BASIC21.52■■□□□ 1.04
RTN3O95197 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC21.52■■□□□ 1.04
RTN3O95197 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC21.52■■□□□ 1.04
RTN3O95197 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
RTN3O95197 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RTN3O95197 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC21.52■■□□□ 1.04
RTN3O95197 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RTN3O95197 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RTN3O95197 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC21.51■■□□□ 1.03
RTN3O95197 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC21.51■■□□□ 1.03
RTN3O95197 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RTN3O95197 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC21.51■■□□□ 1.03
RTN3O95197 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
RTN3O95197 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RTN3O95197 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
RTN3O95197 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RTN3O95197 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RTN3O95197 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RTN3O95197 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC21.51■■□□□ 1.03
RTN3O95197 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RTN3O95197 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RTN3O95197 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC21.51■■□□□ 1.03
RTN3O95197 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC21.51■■□□□ 1.03
RTN3O95197 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC21.51■■□□□ 1.03
RTN3O95197 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RTN3O95197 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC21.51■■□□□ 1.03
RTN3O95197 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
RTN3O95197 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC21.51■■□□□ 1.03
RTN3O95197 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.51■■□□□ 1.03
RTN3O95197 NXN-202ENST00000537628 1340 ntTSL 3 BASIC21.51■■□□□ 1.03
RTN3O95197 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC21.51■■□□□ 1.03
RTN3O95197 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RTN3O95197 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RTN3O95197 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
RTN3O95197 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RTN3O95197 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
RTN3O95197 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RTN3O95197 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RTN3O95197 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RTN3O95197 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RTN3O95197 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC21.5■■□□□ 1.03
RTN3O95197 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RTN3O95197 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC21.5■■□□□ 1.03
RTN3O95197 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC21.5■■□□□ 1.03
RTN3O95197 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC21.5■■□□□ 1.03
RTN3O95197 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
RTN3O95197 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RTN3O95197 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC21.5■■□□□ 1.03
RTN3O95197 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
RTN3O95197 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RTN3O95197 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
RTN3O95197 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RTN3O95197 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RTN3O95197 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RTN3O95197 ABHD17AP1-201ENST00000358206 933 ntBASIC21.49■■□□□ 1.03
RTN3O95197 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC21.49■■□□□ 1.03
RTN3O95197 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC21.49■■□□□ 1.03
RTN3O95197 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
RTN3O95197 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
RTN3O95197 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
RTN3O95197 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
RTN3O95197 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
RTN3O95197 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RTN3O95197 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC21.48■■□□□ 1.03
RTN3O95197 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RTN3O95197 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RTN3O95197 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC21.48■■□□□ 1.03
RTN3O95197 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
RTN3O95197 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RTN3O95197 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RTN3O95197 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC21.48■■□□□ 1.03
RTN3O95197 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC21.48■■□□□ 1.03
RTN3O95197 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
RTN3O95197 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC21.48■■□□□ 1.03
RTN3O95197 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
RTN3O95197 FEM1AP4-201ENST00000443167 1987 ntBASIC21.48■■□□□ 1.03
RTN3O95197 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RTN3O95197 STAC-204ENST00000457375 1366 ntTSL 2 BASIC21.48■■□□□ 1.03
RTN3O95197 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC21.47■■□□□ 1.03
RTN3O95197 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
RTN3O95197 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
RTN3O95197 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC21.47■■□□□ 1.03
RTN3O95197 TSPY20P-201ENST00000450910 630 ntBASIC21.47■■□□□ 1.03
RTN3O95197 GATS-209ENST00000454084 1030 ntTSL 3 BASIC21.47■■□□□ 1.03
RTN3O95197 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC21.47■■□□□ 1.03
RTN3O95197 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC21.47■■□□□ 1.03
RTN3O95197 AL356652.1-201ENST00000615962 565 ntBASIC21.47■■□□□ 1.03
RTN3O95197 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC21.47■■□□□ 1.03
RTN3O95197 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC21.47■■□□□ 1.03
RTN3O95197 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC21.47■■□□□ 1.03
RTN3O95197 AC121338.2-201ENST00000622535 1744 ntBASIC21.46■■□□□ 1.03
RTN3O95197 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms