Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 FP700111.2-201ENST00000619190 1892 ntBASIC21.5■■□□□ 1.03
BEST1O76090 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.5■■□□□ 1.03
BEST1O76090 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
BEST1O76090 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
BEST1O76090 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
BEST1O76090 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
BEST1O76090 CD99P1-205ENST00000527459 561 ntBASIC21.5■■□□□ 1.03
BEST1O76090 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
BEST1O76090 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
BEST1O76090 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC21.5■■□□□ 1.03
BEST1O76090 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
BEST1O76090 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC21.5■■□□□ 1.03
BEST1O76090 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
BEST1O76090 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
BEST1O76090 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC21.5■■□□□ 1.03
BEST1O76090 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
BEST1O76090 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
BEST1O76090 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC21.49■■□□□ 1.03
BEST1O76090 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
BEST1O76090 STK25-205ENST00000405883 1904 ntTSL 2 BASIC21.49■■□□□ 1.03
BEST1O76090 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC21.49■■□□□ 1.03
BEST1O76090 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC21.49■■□□□ 1.03
BEST1O76090 KRT8P36-201ENST00000489121 1440 ntBASIC21.49■■□□□ 1.03
BEST1O76090 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC21.49■■□□□ 1.03
BEST1O76090 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
BEST1O76090 GATS-209ENST00000454084 1030 ntTSL 3 BASIC21.49■■□□□ 1.03
BEST1O76090 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
BEST1O76090 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC21.49■■□□□ 1.03
BEST1O76090 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
BEST1O76090 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
BEST1O76090 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
BEST1O76090 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
BEST1O76090 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
BEST1O76090 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
BEST1O76090 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC21.48■■□□□ 1.03
BEST1O76090 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC21.48■■□□□ 1.03
BEST1O76090 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC21.48■■□□□ 1.03
BEST1O76090 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
BEST1O76090 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
BEST1O76090 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
BEST1O76090 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
BEST1O76090 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
BEST1O76090 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
BEST1O76090 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC21.48■■□□□ 1.03
BEST1O76090 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
BEST1O76090 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC21.48■■□□□ 1.03
BEST1O76090 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
BEST1O76090 NXN-202ENST00000537628 1340 ntTSL 3 BASIC21.48■■□□□ 1.03
BEST1O76090 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
BEST1O76090 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
BEST1O76090 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
BEST1O76090 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
BEST1O76090 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
BEST1O76090 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC21.47■■□□□ 1.03
BEST1O76090 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
BEST1O76090 PGM5P4-201ENST00000421970 445 ntBASIC21.47■■□□□ 1.03
BEST1O76090 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC21.47■■□□□ 1.03
BEST1O76090 RNA5SP413-201ENST00000516373 109 ntBASIC21.47■■□□□ 1.03
BEST1O76090 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC21.47■■□□□ 1.03
BEST1O76090 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC21.47■■□□□ 1.03
BEST1O76090 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC21.47■■□□□ 1.03
BEST1O76090 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC21.47■■□□□ 1.03
BEST1O76090 MIR4651-201ENST00000582622 73 ntBASIC21.47■■□□□ 1.03
BEST1O76090 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
BEST1O76090 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
BEST1O76090 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
BEST1O76090 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
BEST1O76090 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC21.47■■□□□ 1.03
BEST1O76090 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC21.47■■□□□ 1.03
BEST1O76090 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC21.47■■□□□ 1.03
BEST1O76090 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
BEST1O76090 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
BEST1O76090 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC21.46■■□□□ 1.03
BEST1O76090 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
BEST1O76090 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
BEST1O76090 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC21.46■■□□□ 1.03
BEST1O76090 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
BEST1O76090 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC21.46■■□□□ 1.03
BEST1O76090 C2orf69P4-201ENST00000565394 541 ntBASIC21.46■■□□□ 1.03
BEST1O76090 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
BEST1O76090 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC21.46■■□□□ 1.03
BEST1O76090 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC21.46■■□□□ 1.03
BEST1O76090 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.03
BEST1O76090 AC007225.1-201ENST00000566331 1836 ntBASIC21.45■■□□□ 1.03
BEST1O76090 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC21.45■■□□□ 1.03
BEST1O76090 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.03
BEST1O76090 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
BEST1O76090 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
BEST1O76090 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
BEST1O76090 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
BEST1O76090 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
BEST1O76090 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
BEST1O76090 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC21.45■■□□□ 1.02
BEST1O76090 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
BEST1O76090 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC21.45■■□□□ 1.02
BEST1O76090 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC21.45■■□□□ 1.02
BEST1O76090 TBCB-214ENST00000629269 413 ntTSL 5 BASIC21.45■■□□□ 1.02
BEST1O76090 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC21.45■■□□□ 1.02
BEST1O76090 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
BEST1O76090 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms