Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PRAMEF11O60813 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.76■□□□□ 0.91
PRAMEF11O60813 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC20.76■□□□□ 0.91
PRAMEF11O60813 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PRAMEF11O60813 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
PRAMEF11O60813 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.75■□□□□ 0.91
PRAMEF11O60813 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
PRAMEF11O60813 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PRAMEF11O60813 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
PRAMEF11O60813 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
PRAMEF11O60813 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PRAMEF11O60813 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PRAMEF11O60813 MIR4758-201ENST00000577688 71 ntBASIC20.75■□□□□ 0.91
PRAMEF11O60813 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
PRAMEF11O60813 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC20.75■□□□□ 0.91
PRAMEF11O60813 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
PRAMEF11O60813 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
PRAMEF11O60813 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PRAMEF11O60813 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PRAMEF11O60813 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
PRAMEF11O60813 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PRAMEF11O60813 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PRAMEF11O60813 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.74■□□□□ 0.91
PRAMEF11O60813 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PRAMEF11O60813 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
PRAMEF11O60813 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PRAMEF11O60813 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PRAMEF11O60813 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PRAMEF11O60813 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
PRAMEF11O60813 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.74■□□□□ 0.91
PRAMEF11O60813 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PRAMEF11O60813 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
PRAMEF11O60813 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC20.74■□□□□ 0.91
PRAMEF11O60813 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PRAMEF11O60813 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
PRAMEF11O60813 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PRAMEF11O60813 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
PRAMEF11O60813 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
PRAMEF11O60813 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
PRAMEF11O60813 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PRAMEF11O60813 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PRAMEF11O60813 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
PRAMEF11O60813 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PRAMEF11O60813 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PRAMEF11O60813 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PRAMEF11O60813 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
PRAMEF11O60813 AL355802.2-201ENST00000402069 882 ntBASIC20.73■□□□□ 0.91
PRAMEF11O60813 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC20.73■□□□□ 0.91
PRAMEF11O60813 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
PRAMEF11O60813 PPP1R14BP2-201ENST00000426284 444 ntBASIC20.73■□□□□ 0.91
PRAMEF11O60813 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC20.73■□□□□ 0.91
PRAMEF11O60813 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC20.73■□□□□ 0.91
PRAMEF11O60813 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC20.73■□□□□ 0.91
PRAMEF11O60813 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PRAMEF11O60813 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.73■□□□□ 0.91
PRAMEF11O60813 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
PRAMEF11O60813 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PRAMEF11O60813 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PRAMEF11O60813 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PRAMEF11O60813 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PRAMEF11O60813 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PRAMEF11O60813 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PRAMEF11O60813 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
PRAMEF11O60813 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC20.72■□□□□ 0.91
PRAMEF11O60813 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
PRAMEF11O60813 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.72■□□□□ 0.91
PRAMEF11O60813 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PRAMEF11O60813 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PRAMEF11O60813 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PRAMEF11O60813 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
PRAMEF11O60813 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC20.72■□□□□ 0.91
PRAMEF11O60813 AC073210.2-201ENST00000430369 194 ntBASIC20.72■□□□□ 0.91
PRAMEF11O60813 AC098934.4-201ENST00000564127 592 ntBASIC20.72■□□□□ 0.91
PRAMEF11O60813 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC20.72■□□□□ 0.91
PRAMEF11O60813 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC20.72■□□□□ 0.91
PRAMEF11O60813 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PRAMEF11O60813 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PRAMEF11O60813 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
PRAMEF11O60813 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PRAMEF11O60813 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PRAMEF11O60813 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
PRAMEF11O60813 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
PRAMEF11O60813 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.71■□□□□ 0.91
PRAMEF11O60813 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PRAMEF11O60813 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PRAMEF11O60813 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.71■□□□□ 0.91
PRAMEF11O60813 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
PRAMEF11O60813 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PRAMEF11O60813 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PRAMEF11O60813 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
PRAMEF11O60813 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
PRAMEF11O60813 EMC9-206ENST00000560403 872 ntTSL 2 BASIC20.71■□□□□ 0.91
PRAMEF11O60813 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC20.71■□□□□ 0.91
PRAMEF11O60813 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC20.71■□□□□ 0.91
PRAMEF11O60813 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC20.71■□□□□ 0.91
PRAMEF11O60813 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PRAMEF11O60813 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.71■□□□□ 0.91
PRAMEF11O60813 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PRAMEF11O60813 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PRAMEF11O60813 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms