Protein–RNA interactions for Protein: O60568

PLOD3, Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

Predictions only

Length 738 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3O60568 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
PLOD3O60568 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PLOD3O60568 AC027702.1-201ENST00000563810 1770 ntBASIC19.2■□□□□ 0.66
PLOD3O60568 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PLOD3O60568 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC19.2■□□□□ 0.66
PLOD3O60568 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PLOD3O60568 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
PLOD3O60568 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PLOD3O60568 CDV3P1-201ENST00000471403 739 ntBASIC19.2■□□□□ 0.66
PLOD3O60568 DUX4L16-201ENST00000555130 1264 ntBASIC19.2■□□□□ 0.66
PLOD3O60568 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC19.2■□□□□ 0.66
PLOD3O60568 AC011767.1-201ENST00000617410 1153 ntBASIC19.2■□□□□ 0.66
PLOD3O60568 BID-214ENST00000617586 542 ntTSL 5 BASIC19.2■□□□□ 0.66
PLOD3O60568 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PLOD3O60568 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
PLOD3O60568 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PLOD3O60568 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PLOD3O60568 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PLOD3O60568 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PLOD3O60568 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
PLOD3O60568 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PLOD3O60568 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PLOD3O60568 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PLOD3O60568 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PLOD3O60568 AC007225.1-201ENST00000566331 1836 ntBASIC19.19■□□□□ 0.66
PLOD3O60568 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.19■□□□□ 0.66
PLOD3O60568 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC19.19■□□□□ 0.66
PLOD3O60568 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC19.19■□□□□ 0.66
PLOD3O60568 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PLOD3O60568 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC19.19■□□□□ 0.66
PLOD3O60568 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
PLOD3O60568 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PLOD3O60568 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.19■□□□□ 0.66
PLOD3O60568 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PLOD3O60568 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PLOD3O60568 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.19■□□□□ 0.66
PLOD3O60568 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC19.18■□□□□ 0.66
PLOD3O60568 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.18■□□□□ 0.66
PLOD3O60568 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.18■□□□□ 0.66
PLOD3O60568 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.18■□□□□ 0.66
PLOD3O60568 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PLOD3O60568 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
PLOD3O60568 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PLOD3O60568 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PLOD3O60568 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC19.18■□□□□ 0.66
PLOD3O60568 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC19.18■□□□□ 0.66
PLOD3O60568 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
PLOD3O60568 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
PLOD3O60568 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PLOD3O60568 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
PLOD3O60568 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.18■□□□□ 0.66
PLOD3O60568 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PLOD3O60568 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
PLOD3O60568 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PLOD3O60568 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
PLOD3O60568 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PLOD3O60568 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.17■□□□□ 0.66
PLOD3O60568 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PLOD3O60568 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.17■□□□□ 0.66
PLOD3O60568 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
PLOD3O60568 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC19.17■□□□□ 0.66
PLOD3O60568 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.17■□□□□ 0.66
PLOD3O60568 BMP1-204ENST00000397814 836 ntTSL 4 BASIC19.17■□□□□ 0.66
PLOD3O60568 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
PLOD3O60568 CNN2P6-201ENST00000439038 900 ntBASIC19.17■□□□□ 0.66
PLOD3O60568 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.17■□□□□ 0.66
PLOD3O60568 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC19.17■□□□□ 0.66
PLOD3O60568 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC19.17■□□□□ 0.66
PLOD3O60568 FAM21FP-204ENST00000608637 956 ntBASIC19.17■□□□□ 0.66
PLOD3O60568 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
PLOD3O60568 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC19.17■□□□□ 0.66
PLOD3O60568 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC19.17■□□□□ 0.66
PLOD3O60568 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PLOD3O60568 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PLOD3O60568 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PLOD3O60568 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PLOD3O60568 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PLOD3O60568 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
PLOD3O60568 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PLOD3O60568 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PLOD3O60568 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PLOD3O60568 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PLOD3O60568 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC19.16■□□□□ 0.66
PLOD3O60568 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.16■□□□□ 0.66
PLOD3O60568 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PLOD3O60568 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
PLOD3O60568 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PLOD3O60568 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PLOD3O60568 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PLOD3O60568 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PLOD3O60568 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
PLOD3O60568 GLI3-203ENST00000437480 451 ntTSL 2 BASIC19.16■□□□□ 0.66
PLOD3O60568 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PLOD3O60568 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PLOD3O60568 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
PLOD3O60568 AC092437.1-201ENST00000624794 1048 ntBASIC19.16■□□□□ 0.66
PLOD3O60568 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
PLOD3O60568 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC19.16■□□□□ 0.66
PLOD3O60568 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PLOD3O60568 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms