Protein–RNA interactions for Protein: O60293

ZFC3H1, Zinc finger C3H1 domain-containing protein, humanhuman

Known RBP Predictions only

Length 1,989 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFC3H1O60293 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
ZFC3H1O60293 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
ZFC3H1O60293 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ZFC3H1O60293 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
ZFC3H1O60293 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC20.22■□□□□ 0.83
ZFC3H1O60293 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
ZFC3H1O60293 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC20.22■□□□□ 0.83
ZFC3H1O60293 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
ZFC3H1O60293 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ZFC3H1O60293 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ZFC3H1O60293 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.22■□□□□ 0.83
ZFC3H1O60293 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ZFC3H1O60293 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ZFC3H1O60293 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC20.21■□□□□ 0.83
ZFC3H1O60293 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.21■□□□□ 0.83
ZFC3H1O60293 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
ZFC3H1O60293 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.21■□□□□ 0.83
ZFC3H1O60293 FAM21FP-204ENST00000608637 956 ntBASIC20.21■□□□□ 0.83
ZFC3H1O60293 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.21■□□□□ 0.83
ZFC3H1O60293 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC20.21■□□□□ 0.83
ZFC3H1O60293 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.21■□□□□ 0.83
ZFC3H1O60293 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.21■□□□□ 0.83
ZFC3H1O60293 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.21■□□□□ 0.83
ZFC3H1O60293 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ZFC3H1O60293 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ZFC3H1O60293 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ZFC3H1O60293 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC20.21■□□□□ 0.83
ZFC3H1O60293 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC20.21■□□□□ 0.83
ZFC3H1O60293 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ZFC3H1O60293 TBCB-214ENST00000629269 413 ntTSL 5 BASIC20.21■□□□□ 0.83
ZFC3H1O60293 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ZFC3H1O60293 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ZFC3H1O60293 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC20.2■□□□□ 0.82
ZFC3H1O60293 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.2■□□□□ 0.82
ZFC3H1O60293 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
ZFC3H1O60293 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ZFC3H1O60293 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ZFC3H1O60293 AC100791.3-201ENST00000617619 330 ntBASIC20.2■□□□□ 0.82
ZFC3H1O60293 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.2■□□□□ 0.82
ZFC3H1O60293 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ZFC3H1O60293 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
ZFC3H1O60293 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.2■□□□□ 0.82
ZFC3H1O60293 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
ZFC3H1O60293 AC006128.1-201ENST00000624704 1661 ntBASIC20.2■□□□□ 0.82
ZFC3H1O60293 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ZFC3H1O60293 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC20.2■□□□□ 0.82
ZFC3H1O60293 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC20.2■□□□□ 0.82
ZFC3H1O60293 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.2■□□□□ 0.82
ZFC3H1O60293 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
ZFC3H1O60293 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ZFC3H1O60293 MCRIP2P1-201ENST00000394346 511 ntBASIC20.19■□□□□ 0.82
ZFC3H1O60293 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC20.19■□□□□ 0.82
ZFC3H1O60293 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC20.19■□□□□ 0.82
ZFC3H1O60293 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
ZFC3H1O60293 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ZFC3H1O60293 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ZFC3H1O60293 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
ZFC3H1O60293 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
ZFC3H1O60293 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.19■□□□□ 0.82
ZFC3H1O60293 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
ZFC3H1O60293 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
ZFC3H1O60293 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.19■□□□□ 0.82
ZFC3H1O60293 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
ZFC3H1O60293 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ZFC3H1O60293 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
ZFC3H1O60293 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
ZFC3H1O60293 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ZFC3H1O60293 AC093827.2-201ENST00000512654 315 ntBASIC20.19■□□□□ 0.82
ZFC3H1O60293 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC20.19■□□□□ 0.82
ZFC3H1O60293 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
ZFC3H1O60293 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC20.19■□□□□ 0.82
ZFC3H1O60293 PFKL-212ENST00000628044 129 ntTSL 3 BASIC20.19■□□□□ 0.82
ZFC3H1O60293 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
ZFC3H1O60293 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
ZFC3H1O60293 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.19■□□□□ 0.82
ZFC3H1O60293 LINC01006-201ENST00000333319 2292 ntBASIC20.19■□□□□ 0.82
ZFC3H1O60293 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.19■□□□□ 0.82
ZFC3H1O60293 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZFC3H1O60293 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZFC3H1O60293 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ZFC3H1O60293 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZFC3H1O60293 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ZFC3H1O60293 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZFC3H1O60293 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZFC3H1O60293 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZFC3H1O60293 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZFC3H1O60293 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ZFC3H1O60293 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC20.18■□□□□ 0.82
ZFC3H1O60293 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC20.18■□□□□ 0.82
ZFC3H1O60293 GATS-209ENST00000454084 1030 ntTSL 3 BASIC20.18■□□□□ 0.82
ZFC3H1O60293 AC133041.1-202ENST00000642053 222 ntBASIC20.18■□□□□ 0.82
ZFC3H1O60293 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.18■□□□□ 0.82
ZFC3H1O60293 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
ZFC3H1O60293 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZFC3H1O60293 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
ZFC3H1O60293 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC20.17■□□□□ 0.82
ZFC3H1O60293 MIR4758-201ENST00000577688 71 ntBASIC20.17■□□□□ 0.82
ZFC3H1O60293 AC105020.6-201ENST00000621523 1217 ntBASIC20.17■□□□□ 0.82
ZFC3H1O60293 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
ZFC3H1O60293 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms