Protein–RNA interactions for Protein: O43805

SSNA1, Sjoegren syndrome nuclear autoantigen 1, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1O43805 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
SSNA1O43805 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC17.41■□□□□ 0.38
SSNA1O43805 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SSNA1O43805 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SSNA1O43805 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC17.4■□□□□ 0.38
SSNA1O43805 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC17.4■□□□□ 0.38
SSNA1O43805 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SSNA1O43805 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
SSNA1O43805 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.4■□□□□ 0.38
SSNA1O43805 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SSNA1O43805 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SSNA1O43805 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC17.4■□□□□ 0.38
SSNA1O43805 GPX1-201ENST00000419349 1106 ntBASIC17.4■□□□□ 0.38
SSNA1O43805 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC17.4■□□□□ 0.38
SSNA1O43805 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC17.4■□□□□ 0.38
SSNA1O43805 NKILA-201ENST00000613231 537 ntTSL 4 BASIC17.4■□□□□ 0.38
SSNA1O43805 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.4■□□□□ 0.38
SSNA1O43805 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.4■□□□□ 0.38
SSNA1O43805 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
SSNA1O43805 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC17.4■□□□□ 0.38
SSNA1O43805 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SSNA1O43805 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
SSNA1O43805 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
SSNA1O43805 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
SSNA1O43805 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
SSNA1O43805 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
SSNA1O43805 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
SSNA1O43805 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SSNA1O43805 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
SSNA1O43805 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC17.39■□□□□ 0.37
SSNA1O43805 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC17.39■□□□□ 0.37
SSNA1O43805 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SSNA1O43805 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC17.39■□□□□ 0.37
SSNA1O43805 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC17.39■□□□□ 0.37
SSNA1O43805 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SSNA1O43805 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
SSNA1O43805 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SSNA1O43805 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC17.39■□□□□ 0.37
SSNA1O43805 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SSNA1O43805 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC17.39■□□□□ 0.37
SSNA1O43805 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
SSNA1O43805 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
SSNA1O43805 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC17.38■□□□□ 0.37
SSNA1O43805 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SSNA1O43805 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC17.38■□□□□ 0.37
SSNA1O43805 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
SSNA1O43805 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
SSNA1O43805 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SSNA1O43805 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
SSNA1O43805 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SSNA1O43805 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
SSNA1O43805 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SSNA1O43805 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC17.38■□□□□ 0.37
SSNA1O43805 KRT18P24-201ENST00000344739 1156 ntBASIC17.38■□□□□ 0.37
SSNA1O43805 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC17.38■□□□□ 0.37
SSNA1O43805 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SSNA1O43805 AL031602.1-201ENST00000633169 911 ntBASIC17.38■□□□□ 0.37
SSNA1O43805 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SSNA1O43805 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SSNA1O43805 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
SSNA1O43805 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SSNA1O43805 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SSNA1O43805 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC17.38■□□□□ 0.37
SSNA1O43805 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SSNA1O43805 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SSNA1O43805 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SSNA1O43805 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC17.38■□□□□ 0.37
SSNA1O43805 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
SSNA1O43805 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SSNA1O43805 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.37■□□□□ 0.37
SSNA1O43805 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
SSNA1O43805 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
SSNA1O43805 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC17.37■□□□□ 0.37
SSNA1O43805 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
SSNA1O43805 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SSNA1O43805 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC17.37■□□□□ 0.37
SSNA1O43805 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC17.37■□□□□ 0.37
SSNA1O43805 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC17.37■□□□□ 0.37
SSNA1O43805 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SSNA1O43805 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SSNA1O43805 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SSNA1O43805 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
SSNA1O43805 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SSNA1O43805 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SSNA1O43805 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SSNA1O43805 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SSNA1O43805 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SSNA1O43805 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SSNA1O43805 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC17.37■□□□□ 0.37
SSNA1O43805 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SSNA1O43805 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.36■□□□□ 0.37
SSNA1O43805 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SSNA1O43805 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
SSNA1O43805 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
SSNA1O43805 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
SSNA1O43805 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SSNA1O43805 ABHD17AP4-201ENST00000411545 909 ntBASIC17.36■□□□□ 0.37
SSNA1O43805 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SSNA1O43805 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SSNA1O43805 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms