Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
KDELR3O43731 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
KDELR3O43731 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
KDELR3O43731 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
KDELR3O43731 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC20.77■□□□□ 0.91
KDELR3O43731 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
KDELR3O43731 AL121603.2-201ENST00000557373 2117 ntBASIC20.77■□□□□ 0.91
KDELR3O43731 NXN-202ENST00000537628 1340 ntTSL 3 BASIC20.77■□□□□ 0.91
KDELR3O43731 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
KDELR3O43731 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
KDELR3O43731 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.76■□□□□ 0.91
KDELR3O43731 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
KDELR3O43731 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
KDELR3O43731 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC20.76■□□□□ 0.91
KDELR3O43731 RHEB-204ENST00000472642 900 ntTSL 3 BASIC20.76■□□□□ 0.91
KDELR3O43731 AC097658.1-201ENST00000475555 843 ntBASIC20.76■□□□□ 0.91
KDELR3O43731 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
KDELR3O43731 BET1L-207ENST00000529614 560 ntTSL 5 BASIC20.76■□□□□ 0.91
KDELR3O43731 MYC-209ENST00000641252 345 ntBASIC20.76■□□□□ 0.91
KDELR3O43731 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
KDELR3O43731 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
KDELR3O43731 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
KDELR3O43731 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
KDELR3O43731 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
KDELR3O43731 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
KDELR3O43731 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
KDELR3O43731 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
KDELR3O43731 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC20.75■□□□□ 0.91
KDELR3O43731 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC20.75■□□□□ 0.91
KDELR3O43731 APTR-205ENST00000447009 902 ntTSL 2 BASIC20.75■□□□□ 0.91
KDELR3O43731 HES2-205ENST00000487437 968 ntTSL 3 BASIC20.75■□□□□ 0.91
KDELR3O43731 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC20.75■□□□□ 0.91
KDELR3O43731 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
KDELR3O43731 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
KDELR3O43731 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
KDELR3O43731 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC20.75■□□□□ 0.91
KDELR3O43731 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
KDELR3O43731 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
KDELR3O43731 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC20.75■□□□□ 0.91
KDELR3O43731 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
KDELR3O43731 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
KDELR3O43731 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
KDELR3O43731 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
KDELR3O43731 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
KDELR3O43731 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
KDELR3O43731 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.74■□□□□ 0.91
KDELR3O43731 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
KDELR3O43731 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
KDELR3O43731 KLF13-207ENST00000560473 489 ntTSL 3 BASIC20.74■□□□□ 0.91
KDELR3O43731 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
KDELR3O43731 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
KDELR3O43731 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC20.74■□□□□ 0.91
KDELR3O43731 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC20.74■□□□□ 0.91
KDELR3O43731 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
KDELR3O43731 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC20.74■□□□□ 0.91
KDELR3O43731 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.74■□□□□ 0.91
KDELR3O43731 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
KDELR3O43731 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
KDELR3O43731 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.73■□□□□ 0.91
KDELR3O43731 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
KDELR3O43731 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
KDELR3O43731 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
KDELR3O43731 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
KDELR3O43731 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC20.73■□□□□ 0.91
KDELR3O43731 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
KDELR3O43731 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
KDELR3O43731 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
KDELR3O43731 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
KDELR3O43731 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
KDELR3O43731 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.73■□□□□ 0.91
KDELR3O43731 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
KDELR3O43731 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
KDELR3O43731 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
KDELR3O43731 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
KDELR3O43731 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
KDELR3O43731 NME6-213ENST00000451657 871 ntTSL 2 BASIC20.72■□□□□ 0.91
KDELR3O43731 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
KDELR3O43731 C2orf69P4-201ENST00000565394 541 ntBASIC20.72■□□□□ 0.91
KDELR3O43731 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
KDELR3O43731 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.72■□□□□ 0.91
KDELR3O43731 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
KDELR3O43731 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC20.72■□□□□ 0.91
KDELR3O43731 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC20.72■□□□□ 0.91
KDELR3O43731 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC20.72■□□□□ 0.91
KDELR3O43731 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
KDELR3O43731 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
KDELR3O43731 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
KDELR3O43731 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.71■□□□□ 0.91
KDELR3O43731 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.71■□□□□ 0.91
KDELR3O43731 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.71■□□□□ 0.91
KDELR3O43731 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
KDELR3O43731 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
KDELR3O43731 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
KDELR3O43731 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC20.71■□□□□ 0.91
KDELR3O43731 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC20.71■□□□□ 0.91
KDELR3O43731 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
KDELR3O43731 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC20.71■□□□□ 0.91
KDELR3O43731 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
KDELR3O43731 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC20.71■□□□□ 0.91
KDELR3O43731 AC083880.1-201ENST00000608266 535 ntBASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms