Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.29■□□□□ 0.84
PHGDHO43175 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.29■□□□□ 0.84
PHGDHO43175 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
PHGDHO43175 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
PHGDHO43175 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PHGDHO43175 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PHGDHO43175 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PHGDHO43175 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.28■□□□□ 0.84
PHGDHO43175 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PHGDHO43175 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PHGDHO43175 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC20.28■□□□□ 0.84
PHGDHO43175 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PHGDHO43175 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.28■□□□□ 0.84
PHGDHO43175 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
PHGDHO43175 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
PHGDHO43175 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC20.28■□□□□ 0.84
PHGDHO43175 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC20.28■□□□□ 0.84
PHGDHO43175 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PHGDHO43175 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC20.28■□□□□ 0.84
PHGDHO43175 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PHGDHO43175 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
PHGDHO43175 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
PHGDHO43175 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PHGDHO43175 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PHGDHO43175 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PHGDHO43175 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
PHGDHO43175 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PHGDHO43175 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
PHGDHO43175 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
PHGDHO43175 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PHGDHO43175 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.27■□□□□ 0.84
PHGDHO43175 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.27■□□□□ 0.84
PHGDHO43175 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.27■□□□□ 0.84
PHGDHO43175 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.27■□□□□ 0.84
PHGDHO43175 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
PHGDHO43175 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.27■□□□□ 0.84
PHGDHO43175 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PHGDHO43175 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC20.27■□□□□ 0.84
PHGDHO43175 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PHGDHO43175 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PHGDHO43175 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PHGDHO43175 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
PHGDHO43175 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PHGDHO43175 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PHGDHO43175 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
PHGDHO43175 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.84
PHGDHO43175 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
PHGDHO43175 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.83
PHGDHO43175 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
PHGDHO43175 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
PHGDHO43175 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
PHGDHO43175 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
PHGDHO43175 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
PHGDHO43175 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
PHGDHO43175 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
PHGDHO43175 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
PHGDHO43175 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
PHGDHO43175 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
PHGDHO43175 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.26■□□□□ 0.83
PHGDHO43175 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
PHGDHO43175 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PHGDHO43175 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PHGDHO43175 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PHGDHO43175 KRT18P61-201ENST00000585825 1298 ntBASIC20.26■□□□□ 0.83
PHGDHO43175 MIR2861-201ENST00000636310 90 ntBASIC20.26■□□□□ 0.83
PHGDHO43175 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC20.26■□□□□ 0.83
PHGDHO43175 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
PHGDHO43175 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.26■□□□□ 0.83
PHGDHO43175 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
PHGDHO43175 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20.26■□□□□ 0.83
PHGDHO43175 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PHGDHO43175 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.26■□□□□ 0.83
PHGDHO43175 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PHGDHO43175 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PHGDHO43175 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.26■□□□□ 0.83
PHGDHO43175 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.26■□□□□ 0.83
PHGDHO43175 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PHGDHO43175 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PHGDHO43175 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PHGDHO43175 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PHGDHO43175 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PHGDHO43175 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.25■□□□□ 0.83
PHGDHO43175 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.25■□□□□ 0.83
PHGDHO43175 KRT18P20-201ENST00000548986 1279 ntBASIC20.25■□□□□ 0.83
PHGDHO43175 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC20.25■□□□□ 0.83
PHGDHO43175 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC20.25■□□□□ 0.83
PHGDHO43175 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PHGDHO43175 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
PHGDHO43175 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC20.25■□□□□ 0.83
PHGDHO43175 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PHGDHO43175 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
PHGDHO43175 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PHGDHO43175 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC20.24■□□□□ 0.83
PHGDHO43175 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PHGDHO43175 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
PHGDHO43175 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PHGDHO43175 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
PHGDHO43175 AC091799.1-201ENST00000422823 811 ntBASIC20.24■□□□□ 0.83
PHGDHO43175 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PHGDHO43175 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms