Protein–RNA interactions for Protein: O15269

SPTLC1, Serine palmitoyltransferase 1, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1O15269 INO80E-214ENST00000620599 515 ntTSL 2 BASIC21.89■■□□□ 1.09
SPTLC1O15269 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
SPTLC1O15269 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
SPTLC1O15269 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC21.89■■□□□ 1.09
SPTLC1O15269 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SPTLC1O15269 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SPTLC1O15269 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
SPTLC1O15269 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SPTLC1O15269 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SPTLC1O15269 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SPTLC1O15269 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
SPTLC1O15269 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SPTLC1O15269 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SPTLC1O15269 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
SPTLC1O15269 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SPTLC1O15269 AL356652.1-201ENST00000615962 565 ntBASIC21.88■■□□□ 1.09
SPTLC1O15269 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SPTLC1O15269 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SPTLC1O15269 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SPTLC1O15269 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
SPTLC1O15269 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SPTLC1O15269 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
SPTLC1O15269 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC21.88■■□□□ 1.09
SPTLC1O15269 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SPTLC1O15269 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC21.87■■□□□ 1.09
SPTLC1O15269 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC21.87■■□□□ 1.09
SPTLC1O15269 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
SPTLC1O15269 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC21.87■■□□□ 1.09
SPTLC1O15269 AP006294.2-201ENST00000641667 209 ntBASIC21.87■■□□□ 1.09
SPTLC1O15269 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
SPTLC1O15269 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
SPTLC1O15269 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC21.87■■□□□ 1.09
SPTLC1O15269 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
SPTLC1O15269 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SPTLC1O15269 NXN-202ENST00000537628 1340 ntTSL 3 BASIC21.86■■□□□ 1.09
SPTLC1O15269 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC21.86■■□□□ 1.09
SPTLC1O15269 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SPTLC1O15269 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC21.86■■□□□ 1.09
SPTLC1O15269 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SPTLC1O15269 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC21.86■■□□□ 1.09
SPTLC1O15269 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC21.86■■□□□ 1.09
SPTLC1O15269 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC21.86■■□□□ 1.09
SPTLC1O15269 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
SPTLC1O15269 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC21.86■■□□□ 1.09
SPTLC1O15269 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
SPTLC1O15269 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
SPTLC1O15269 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
SPTLC1O15269 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
SPTLC1O15269 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SPTLC1O15269 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SPTLC1O15269 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC21.85■■□□□ 1.09
SPTLC1O15269 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SPTLC1O15269 PRORSD1P-201ENST00000295112 541 ntBASIC21.85■■□□□ 1.09
SPTLC1O15269 MFF-205ENST00000354503 1085 ntTSL 2 BASIC21.85■■□□□ 1.09
SPTLC1O15269 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC21.85■■□□□ 1.09
SPTLC1O15269 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
SPTLC1O15269 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC21.85■■□□□ 1.09
SPTLC1O15269 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC21.85■■□□□ 1.09
SPTLC1O15269 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC21.85■■□□□ 1.09
SPTLC1O15269 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC21.85■■□□□ 1.09
SPTLC1O15269 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC21.85■■□□□ 1.09
SPTLC1O15269 C2orf69P4-201ENST00000565394 541 ntBASIC21.85■■□□□ 1.09
SPTLC1O15269 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC21.85■■□□□ 1.09
SPTLC1O15269 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC21.85■■□□□ 1.09
SPTLC1O15269 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SPTLC1O15269 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
SPTLC1O15269 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC21.85■■□□□ 1.09
SPTLC1O15269 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC21.84■■□□□ 1.09
SPTLC1O15269 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
SPTLC1O15269 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SPTLC1O15269 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SPTLC1O15269 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SPTLC1O15269 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
SPTLC1O15269 GAS7-202ENST00000396115 929 ntTSL 5 BASIC21.84■■□□□ 1.09
SPTLC1O15269 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC21.84■■□□□ 1.09
SPTLC1O15269 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC21.84■■□□□ 1.09
SPTLC1O15269 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC21.84■■□□□ 1.09
SPTLC1O15269 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC21.84■■□□□ 1.09
SPTLC1O15269 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC21.84■■□□□ 1.09
SPTLC1O15269 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC21.84■■□□□ 1.09
SPTLC1O15269 MIR2861-201ENST00000636310 90 ntBASIC21.84■■□□□ 1.09
SPTLC1O15269 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC21.84■■□□□ 1.09
SPTLC1O15269 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SPTLC1O15269 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SPTLC1O15269 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC21.84■■□□□ 1.09
SPTLC1O15269 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SPTLC1O15269 ERF-202ENST00000440177 2032 ntTSL 2 BASIC21.84■■□□□ 1.09
SPTLC1O15269 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SPTLC1O15269 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC21.83■■□□□ 1.09
SPTLC1O15269 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
SPTLC1O15269 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
SPTLC1O15269 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SPTLC1O15269 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SPTLC1O15269 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
SPTLC1O15269 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
SPTLC1O15269 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC21.83■■□□□ 1.09
SPTLC1O15269 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC21.83■■□□□ 1.09
SPTLC1O15269 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC21.83■■□□□ 1.09
SPTLC1O15269 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC21.83■■□□□ 1.09
SPTLC1O15269 HLA-B-256ENST00000639848 1089 ntBASIC21.83■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms