Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC33.56■■■□□ 2.96
CHD1O14646 AC068473.5-201ENST00000616428 2072 ntBASIC33.56■■■□□ 2.96
CHD1O14646 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC33.56■■■□□ 2.96
CHD1O14646 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC33.56■■■□□ 2.96
CHD1O14646 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC33.56■■■□□ 2.96
CHD1O14646 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC33.56■■■□□ 2.96
CHD1O14646 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC33.56■■■□□ 2.96
CHD1O14646 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC33.55■■■□□ 2.96
CHD1O14646 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC33.55■■■□□ 2.96
CHD1O14646 AC009947.2-201ENST00000444014 672 ntBASIC33.55■■■□□ 2.96
CHD1O14646 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC33.55■■■□□ 2.96
CHD1O14646 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC33.55■■■□□ 2.96
CHD1O14646 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC33.54■■■□□ 2.96
CHD1O14646 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC33.54■■■□□ 2.96
CHD1O14646 LGALS8-AS1-201ENST00000487567 1457 ntBASIC33.54■■■□□ 2.96
CHD1O14646 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC33.54■■■□□ 2.96
CHD1O14646 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC33.54■■■□□ 2.96
CHD1O14646 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC33.54■■■□□ 2.96
CHD1O14646 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC33.54■■■□□ 2.96
CHD1O14646 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC33.54■■■□□ 2.96
CHD1O14646 NIFKP9-201ENST00000419265 221 ntBASIC33.53■■■□□ 2.96
CHD1O14646 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC33.53■■■□□ 2.96
CHD1O14646 AK4P3-201ENST00000418260 669 ntBASIC33.53■■■□□ 2.96
CHD1O14646 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC33.53■■■□□ 2.96
CHD1O14646 AL121906.2-201ENST00000621597 723 ntBASIC33.53■■■□□ 2.96
CHD1O14646 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC33.53■■■□□ 2.96
CHD1O14646 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC33.52■■■□□ 2.96
CHD1O14646 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC33.52■■■□□ 2.96
CHD1O14646 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC33.52■■■□□ 2.96
CHD1O14646 KRT16P1-201ENST00000399124 1418 ntBASIC33.52■■■□□ 2.96
CHD1O14646 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC33.52■■■□□ 2.96
CHD1O14646 COPS8-203ENST00000409334 794 ntTSL 5 BASIC33.52■■■□□ 2.96
CHD1O14646 PGM5P4-201ENST00000421970 445 ntBASIC33.52■■■□□ 2.96
CHD1O14646 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC33.52■■■□□ 2.96
CHD1O14646 C2orf69P3-201ENST00000565542 1120 ntBASIC33.52■■■□□ 2.96
CHD1O14646 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC33.52■■■□□ 2.96
CHD1O14646 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC33.52■■■□□ 2.96
CHD1O14646 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC33.52■■■□□ 2.96
CHD1O14646 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC33.51■■■□□ 2.96
CHD1O14646 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC33.51■■■□□ 2.96
CHD1O14646 CLN6-221ENST00000637494 765 ntTSL 5 BASIC33.51■■■□□ 2.96
CHD1O14646 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC33.51■■■□□ 2.96
CHD1O14646 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC33.51■■■□□ 2.95
CHD1O14646 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC33.51■■■□□ 2.95
CHD1O14646 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC33.51■■■□□ 2.95
CHD1O14646 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC33.5■■■□□ 2.95
CHD1O14646 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC33.5■■■□□ 2.95
CHD1O14646 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC33.5■■■□□ 2.95
CHD1O14646 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC33.5■■■□□ 2.95
CHD1O14646 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC33.5■■■□□ 2.95
CHD1O14646 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC33.5■■■□□ 2.95
CHD1O14646 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC33.5■■■□□ 2.95
CHD1O14646 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC33.5■■■□□ 2.95
CHD1O14646 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC33.5■■■□□ 2.95
CHD1O14646 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC33.5■■■□□ 2.95
CHD1O14646 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC33.5■■■□□ 2.95
CHD1O14646 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC33.49■■■□□ 2.95
CHD1O14646 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC33.49■■■□□ 2.95
CHD1O14646 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC33.49■■■□□ 2.95
CHD1O14646 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC33.49■■■□□ 2.95
CHD1O14646 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC33.49■■■□□ 2.95
CHD1O14646 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC33.49■■■□□ 2.95
CHD1O14646 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC33.49■■■□□ 2.95
CHD1O14646 AC020928.2-201ENST00000588717 2197 ntBASIC33.48■■■□□ 2.95
CHD1O14646 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC33.48■■■□□ 2.95
CHD1O14646 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC33.48■■■□□ 2.95
CHD1O14646 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC33.48■■■□□ 2.95
CHD1O14646 AP002982.1-201ENST00000492365 877 ntBASIC33.48■■■□□ 2.95
CHD1O14646 F2R-202ENST00000505600 442 ntTSL 2 BASIC33.48■■■□□ 2.95
CHD1O14646 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC33.48■■■□□ 2.95
CHD1O14646 NARF-205ENST00000412079 1760 ntTSL 5 BASIC33.48■■■□□ 2.95
CHD1O14646 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC33.48■■■□□ 2.95
CHD1O14646 AL031133.1-201ENST00000406807 723 ntBASIC33.48■■■□□ 2.95
CHD1O14646 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC33.48■■■□□ 2.95
CHD1O14646 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC33.48■■■□□ 2.95
CHD1O14646 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC33.48■■■□□ 2.95
CHD1O14646 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC33.47■■■□□ 2.95
CHD1O14646 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC33.47■■■□□ 2.95
CHD1O14646 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC33.47■■■□□ 2.95
CHD1O14646 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC33.47■■■□□ 2.95
CHD1O14646 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC33.47■■■□□ 2.95
CHD1O14646 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC33.47■■■□□ 2.95
CHD1O14646 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC33.47■■■□□ 2.95
CHD1O14646 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC33.46■■■□□ 2.95
CHD1O14646 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC33.46■■■□□ 2.95
CHD1O14646 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC33.46■■■□□ 2.95
CHD1O14646 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC33.46■■■□□ 2.95
CHD1O14646 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC33.46■■■□□ 2.95
CHD1O14646 AC026471.6-201ENST00000622954 1905 ntBASIC33.46■■■□□ 2.95
CHD1O14646 AL450487.1-201ENST00000426799 995 ntBASIC33.46■■■□□ 2.95
CHD1O14646 LIN28AP1-201ENST00000429574 405 ntBASIC33.46■■■□□ 2.95
CHD1O14646 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC33.46■■■□□ 2.95
CHD1O14646 ECEL1P2-202ENST00000465689 757 ntBASIC33.46■■■□□ 2.95
CHD1O14646 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC33.46■■■□□ 2.95
CHD1O14646 AP000550.4-202ENST00000639755 178 ntBASIC33.46■■■□□ 2.95
CHD1O14646 LTK-203ENST00000453182 2412 ntTSL 2 BASIC33.46■■■□□ 2.95
CHD1O14646 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC33.46■■■□□ 2.95
CHD1O14646 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC33.46■■■□□ 2.95
CHD1O14646 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC33.45■■■□□ 2.95
CHD1O14646 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC33.45■■■□□ 2.95
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms