Protein–RNA interactions for Protein: O14579

COPE, Coatomer subunit epsilon, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPEO14579 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
COPEO14579 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
COPEO14579 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
COPEO14579 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
COPEO14579 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
COPEO14579 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
COPEO14579 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC20.37■□□□□ 0.85
COPEO14579 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
COPEO14579 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.37■□□□□ 0.85
COPEO14579 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
COPEO14579 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
COPEO14579 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC20.37■□□□□ 0.85
COPEO14579 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC20.37■□□□□ 0.85
COPEO14579 AC027682.1-201ENST00000562846 899 ntBASIC20.37■□□□□ 0.85
COPEO14579 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC20.37■□□□□ 0.85
COPEO14579 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
COPEO14579 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20.37■□□□□ 0.85
COPEO14579 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC20.37■□□□□ 0.85
COPEO14579 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC20.37■□□□□ 0.85
COPEO14579 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20.37■□□□□ 0.85
COPEO14579 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.37■□□□□ 0.85
COPEO14579 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
COPEO14579 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
COPEO14579 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
COPEO14579 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
COPEO14579 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
COPEO14579 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC20.36■□□□□ 0.85
COPEO14579 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC20.36■□□□□ 0.85
COPEO14579 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
COPEO14579 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
COPEO14579 MIR572-201ENST00000384983 95 ntBASIC20.36■□□□□ 0.85
COPEO14579 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC20.36■□□□□ 0.85
COPEO14579 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.36■□□□□ 0.85
COPEO14579 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC20.36■□□□□ 0.85
COPEO14579 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC20.36■□□□□ 0.85
COPEO14579 AC008175.2-201ENST00000612840 297 ntBASIC20.36■□□□□ 0.85
COPEO14579 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC20.36■□□□□ 0.85
COPEO14579 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
COPEO14579 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
COPEO14579 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
COPEO14579 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
COPEO14579 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
COPEO14579 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
COPEO14579 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC20.36■□□□□ 0.85
COPEO14579 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
COPEO14579 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
COPEO14579 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
COPEO14579 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
COPEO14579 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
COPEO14579 SMG8-203ENST00000578922 2178 ntBASIC20.35■□□□□ 0.85
COPEO14579 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.35■□□□□ 0.85
COPEO14579 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC20.35■□□□□ 0.85
COPEO14579 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
COPEO14579 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
COPEO14579 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
COPEO14579 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC20.35■□□□□ 0.85
COPEO14579 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
COPEO14579 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
COPEO14579 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC20.35■□□□□ 0.85
COPEO14579 POU5F1P4-201ENST00000413175 1085 ntBASIC20.35■□□□□ 0.85
COPEO14579 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC20.35■□□□□ 0.85
COPEO14579 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
COPEO14579 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
COPEO14579 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC20.35■□□□□ 0.85
COPEO14579 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC20.35■□□□□ 0.85
COPEO14579 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
COPEO14579 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
COPEO14579 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
COPEO14579 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC20.35■□□□□ 0.85
COPEO14579 AC087289.5-201ENST00000586076 3175 ntBASIC20.35■□□□□ 0.85
COPEO14579 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
COPEO14579 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
COPEO14579 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
COPEO14579 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
COPEO14579 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
COPEO14579 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
COPEO14579 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC20.34■□□□□ 0.85
COPEO14579 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.34■□□□□ 0.85
COPEO14579 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
COPEO14579 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC20.34■□□□□ 0.85
COPEO14579 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
COPEO14579 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC20.34■□□□□ 0.85
COPEO14579 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
COPEO14579 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC20.34■□□□□ 0.85
COPEO14579 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
COPEO14579 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.34■□□□□ 0.85
COPEO14579 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
COPEO14579 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.34■□□□□ 0.85
COPEO14579 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC20.34■□□□□ 0.85
COPEO14579 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
COPEO14579 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
COPEO14579 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
COPEO14579 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
COPEO14579 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
COPEO14579 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
COPEO14579 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
COPEO14579 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC20.33■□□□□ 0.85
COPEO14579 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
COPEO14579 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
COPEO14579 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms