Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
UBFD1O14562 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
UBFD1O14562 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
UBFD1O14562 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.81■□□□□ 0.76
UBFD1O14562 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
UBFD1O14562 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC19.81■□□□□ 0.76
UBFD1O14562 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
UBFD1O14562 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
UBFD1O14562 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
UBFD1O14562 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
UBFD1O14562 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
UBFD1O14562 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
UBFD1O14562 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
UBFD1O14562 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC19.81■□□□□ 0.76
UBFD1O14562 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC19.81■□□□□ 0.76
UBFD1O14562 CCDC92B-201ENST00000575506 885 ntBASIC19.81■□□□□ 0.76
UBFD1O14562 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC19.81■□□□□ 0.76
UBFD1O14562 SP2-202ENST00000613139 908 ntTSL 5 BASIC19.81■□□□□ 0.76
UBFD1O14562 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
UBFD1O14562 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
UBFD1O14562 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.81■□□□□ 0.76
UBFD1O14562 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.8■□□□□ 0.76
UBFD1O14562 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
UBFD1O14562 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
UBFD1O14562 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC19.8■□□□□ 0.76
UBFD1O14562 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
UBFD1O14562 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
UBFD1O14562 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
UBFD1O14562 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
UBFD1O14562 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
UBFD1O14562 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC19.8■□□□□ 0.76
UBFD1O14562 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
UBFD1O14562 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
UBFD1O14562 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
UBFD1O14562 RBM17P2-201ENST00000616397 1405 ntBASIC19.8■□□□□ 0.76
UBFD1O14562 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
UBFD1O14562 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
UBFD1O14562 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
UBFD1O14562 COX20-201ENST00000366528 568 ntTSL 2 BASIC19.8■□□□□ 0.76
UBFD1O14562 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
UBFD1O14562 YBX1P1-201ENST00000445822 960 ntBASIC19.8■□□□□ 0.76
UBFD1O14562 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC19.8■□□□□ 0.76
UBFD1O14562 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
UBFD1O14562 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
UBFD1O14562 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
UBFD1O14562 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
UBFD1O14562 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
UBFD1O14562 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.8■□□□□ 0.76
UBFD1O14562 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
UBFD1O14562 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
UBFD1O14562 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
UBFD1O14562 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
UBFD1O14562 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.79■□□□□ 0.76
UBFD1O14562 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
UBFD1O14562 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.79■□□□□ 0.76
UBFD1O14562 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
UBFD1O14562 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.79■□□□□ 0.76
UBFD1O14562 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.79■□□□□ 0.76
UBFD1O14562 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
UBFD1O14562 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
UBFD1O14562 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.79■□□□□ 0.76
UBFD1O14562 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.79■□□□□ 0.76
UBFD1O14562 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
UBFD1O14562 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
UBFD1O14562 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.79■□□□□ 0.76
UBFD1O14562 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
UBFD1O14562 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
UBFD1O14562 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC19.79■□□□□ 0.76
UBFD1O14562 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
UBFD1O14562 TESC-206ENST00000541210 936 ntTSL 3 BASIC19.79■□□□□ 0.76
UBFD1O14562 KRT18P20-201ENST00000548986 1279 ntBASIC19.79■□□□□ 0.76
UBFD1O14562 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.79■□□□□ 0.76
UBFD1O14562 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
UBFD1O14562 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
UBFD1O14562 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.79■□□□□ 0.76
UBFD1O14562 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
UBFD1O14562 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
UBFD1O14562 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
UBFD1O14562 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
UBFD1O14562 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
UBFD1O14562 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
UBFD1O14562 AC125437.2-201ENST00000625180 2167 ntBASIC19.78■□□□□ 0.76
UBFD1O14562 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
UBFD1O14562 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
UBFD1O14562 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
UBFD1O14562 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
UBFD1O14562 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
UBFD1O14562 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
UBFD1O14562 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
UBFD1O14562 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC19.78■□□□□ 0.76
UBFD1O14562 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC19.78■□□□□ 0.76
UBFD1O14562 KRT18P61-201ENST00000585825 1298 ntBASIC19.78■□□□□ 0.76
UBFD1O14562 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
UBFD1O14562 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC19.78■□□□□ 0.76
UBFD1O14562 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
UBFD1O14562 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
UBFD1O14562 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC19.78■□□□□ 0.76
UBFD1O14562 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
UBFD1O14562 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
UBFD1O14562 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms