Protein–RNA interactions for Protein: O14545

TRAFD1, TRAF-type zinc finger domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1O14545 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.91■□□□□ 0.94
TRAFD1O14545 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.9■□□□□ 0.94
TRAFD1O14545 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
TRAFD1O14545 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRAFD1O14545 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC20.9■□□□□ 0.94
TRAFD1O14545 TK2-208ENST00000545043 1120 ntTSL 2 BASIC20.9■□□□□ 0.94
TRAFD1O14545 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TRAFD1O14545 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRAFD1O14545 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRAFD1O14545 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.9■□□□□ 0.94
TRAFD1O14545 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.9■□□□□ 0.94
TRAFD1O14545 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRAFD1O14545 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.9■□□□□ 0.94
TRAFD1O14545 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRAFD1O14545 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRAFD1O14545 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
TRAFD1O14545 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRAFD1O14545 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC20.89■□□□□ 0.93
TRAFD1O14545 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRAFD1O14545 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRAFD1O14545 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRAFD1O14545 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRAFD1O14545 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.89■□□□□ 0.93
TRAFD1O14545 CYP2T1P-201ENST00000432607 1285 ntBASIC20.89■□□□□ 0.93
TRAFD1O14545 MAP2K4P1-201ENST00000438453 1195 ntBASIC20.89■□□□□ 0.93
TRAFD1O14545 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC20.89■□□□□ 0.93
TRAFD1O14545 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC20.89■□□□□ 0.93
TRAFD1O14545 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRAFD1O14545 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.89■□□□□ 0.93
TRAFD1O14545 AL049796.1-201ENST00000565336 1766 ntBASIC20.89■□□□□ 0.93
TRAFD1O14545 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.89■□□□□ 0.93
TRAFD1O14545 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRAFD1O14545 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.89■□□□□ 0.93
TRAFD1O14545 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.89■□□□□ 0.93
TRAFD1O14545 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRAFD1O14545 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
TRAFD1O14545 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRAFD1O14545 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TRAFD1O14545 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.88■□□□□ 0.93
TRAFD1O14545 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRAFD1O14545 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRAFD1O14545 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
TRAFD1O14545 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
TRAFD1O14545 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRAFD1O14545 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TRAFD1O14545 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.88■□□□□ 0.93
TRAFD1O14545 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
TRAFD1O14545 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
TRAFD1O14545 AC006970.2-201ENST00000450065 779 ntBASIC20.88■□□□□ 0.93
TRAFD1O14545 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC20.88■□□□□ 0.93
TRAFD1O14545 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRAFD1O14545 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
TRAFD1O14545 AL391422.3-201ENST00000603791 2761 ntBASIC20.88■□□□□ 0.93
TRAFD1O14545 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
TRAFD1O14545 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.88■□□□□ 0.93
TRAFD1O14545 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20.88■□□□□ 0.93
TRAFD1O14545 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRAFD1O14545 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.88■□□□□ 0.93
TRAFD1O14545 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC20.87■□□□□ 0.93
TRAFD1O14545 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRAFD1O14545 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.87■□□□□ 0.93
TRAFD1O14545 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.87■□□□□ 0.93
TRAFD1O14545 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRAFD1O14545 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.87■□□□□ 0.93
TRAFD1O14545 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRAFD1O14545 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TRAFD1O14545 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRAFD1O14545 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC20.87■□□□□ 0.93
TRAFD1O14545 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC20.87■□□□□ 0.93
TRAFD1O14545 NCF1B-203ENST00000435988 1254 ntBASIC20.87■□□□□ 0.93
TRAFD1O14545 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC20.87■□□□□ 0.93
TRAFD1O14545 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
TRAFD1O14545 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC20.87■□□□□ 0.93
TRAFD1O14545 AC016405.3-201ENST00000607710 860 ntBASIC20.87■□□□□ 0.93
TRAFD1O14545 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRAFD1O14545 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TRAFD1O14545 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRAFD1O14545 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TRAFD1O14545 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRAFD1O14545 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRAFD1O14545 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.86■□□□□ 0.93
TRAFD1O14545 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRAFD1O14545 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
TRAFD1O14545 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TRAFD1O14545 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
TRAFD1O14545 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.86■□□□□ 0.93
TRAFD1O14545 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.86■□□□□ 0.93
TRAFD1O14545 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.86■□□□□ 0.93
TRAFD1O14545 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRAFD1O14545 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRAFD1O14545 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRAFD1O14545 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
TRAFD1O14545 AC133552.2-202ENST00000575694 574 ntBASIC20.86■□□□□ 0.93
TRAFD1O14545 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC20.86■□□□□ 0.93
TRAFD1O14545 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TRAFD1O14545 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRAFD1O14545 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRAFD1O14545 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC20.86■□□□□ 0.93
TRAFD1O14545 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TRAFD1O14545 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms