Protein–RNA interactions for Protein: O14493

CLDN4, Claudin-4, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4O14493 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.23■□□□□ 0.67
CLDN4O14493 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLDN4O14493 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLDN4O14493 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.23■□□□□ 0.67
CLDN4O14493 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
CLDN4O14493 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLDN4O14493 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLDN4O14493 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLDN4O14493 LSM12P1-201ENST00000411836 588 ntBASIC19.23■□□□□ 0.67
CLDN4O14493 HLA-L-209ENST00000420110 1011 ntBASIC19.23■□□□□ 0.67
CLDN4O14493 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC19.23■□□□□ 0.67
CLDN4O14493 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLDN4O14493 AC104771.1-201ENST00000603335 964 ntBASIC19.23■□□□□ 0.67
CLDN4O14493 AL589743.5-201ENST00000616611 1050 ntBASIC19.23■□□□□ 0.67
CLDN4O14493 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CLDN4O14493 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC19.23■□□□□ 0.67
CLDN4O14493 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLDN4O14493 AC087633.2-202ENST00000565166 1439 ntBASIC19.23■□□□□ 0.67
CLDN4O14493 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CLDN4O14493 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLDN4O14493 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.23■□□□□ 0.67
CLDN4O14493 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLDN4O14493 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC19.22■□□□□ 0.67
CLDN4O14493 CLDN5-201ENST00000403084 2357 ntBASIC19.22■□□□□ 0.67
CLDN4O14493 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.22■□□□□ 0.67
CLDN4O14493 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
CLDN4O14493 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLDN4O14493 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
CLDN4O14493 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
CLDN4O14493 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLDN4O14493 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC19.22■□□□□ 0.67
CLDN4O14493 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLDN4O14493 BX276092.2-201ENST00000417668 665 ntBASIC19.22■□□□□ 0.67
CLDN4O14493 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CLDN4O14493 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC19.22■□□□□ 0.67
CLDN4O14493 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLDN4O14493 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.22■□□□□ 0.67
CLDN4O14493 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CLDN4O14493 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLDN4O14493 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.22■□□□□ 0.67
CLDN4O14493 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.22■□□□□ 0.67
CLDN4O14493 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CLDN4O14493 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLDN4O14493 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CLDN4O14493 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
CLDN4O14493 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLDN4O14493 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLDN4O14493 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
CLDN4O14493 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CLDN4O14493 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLDN4O14493 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CLDN4O14493 MIPEPP3-201ENST00000412105 444 ntBASIC19.21■□□□□ 0.67
CLDN4O14493 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC19.21■□□□□ 0.67
CLDN4O14493 MIR4758-201ENST00000577688 71 ntBASIC19.21■□□□□ 0.67
CLDN4O14493 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC19.21■□□□□ 0.67
CLDN4O14493 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC19.21■□□□□ 0.67
CLDN4O14493 MARS-234ENST00000630571 216 ntTSL 5 BASIC19.21■□□□□ 0.67
CLDN4O14493 MARS-235ENST00000630803 183 ntTSL 3 BASIC19.21■□□□□ 0.67
CLDN4O14493 MIR2861-201ENST00000636310 90 ntBASIC19.21■□□□□ 0.67
CLDN4O14493 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLDN4O14493 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLDN4O14493 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.21■□□□□ 0.67
CLDN4O14493 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
CLDN4O14493 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLDN4O14493 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLDN4O14493 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLDN4O14493 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
CLDN4O14493 GCK-205ENST00000437084 1385 ntTSL 5 BASIC19.2■□□□□ 0.66
CLDN4O14493 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
CLDN4O14493 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLDN4O14493 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLDN4O14493 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLDN4O14493 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC19.2■□□□□ 0.66
CLDN4O14493 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
CLDN4O14493 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLDN4O14493 AL355472.2-201ENST00000422958 438 ntBASIC19.2■□□□□ 0.66
CLDN4O14493 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC19.2■□□□□ 0.66
CLDN4O14493 HES2-205ENST00000487437 968 ntTSL 3 BASIC19.2■□□□□ 0.66
CLDN4O14493 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC19.2■□□□□ 0.66
CLDN4O14493 AL356652.1-201ENST00000615962 565 ntBASIC19.2■□□□□ 0.66
CLDN4O14493 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLDN4O14493 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.2■□□□□ 0.66
CLDN4O14493 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CLDN4O14493 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CLDN4O14493 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLDN4O14493 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLDN4O14493 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLDN4O14493 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLDN4O14493 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLDN4O14493 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
CLDN4O14493 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC19.19■□□□□ 0.66
CLDN4O14493 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
CLDN4O14493 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLDN4O14493 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLDN4O14493 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLDN4O14493 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLDN4O14493 SERPINH1P1-201ENST00000419794 1249 ntBASIC19.19■□□□□ 0.66
CLDN4O14493 GUSBP6-202ENST00000438529 1198 ntBASIC19.19■□□□□ 0.66
CLDN4O14493 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC19.19■□□□□ 0.66
CLDN4O14493 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms