Protein–RNA interactions for Protein: O00716

E2F3, Transcription factor E2F3, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E2F3O00716 AC016769.1-201ENST00000409132 1010 ntBASIC19.91■□□□□ 0.78
E2F3O00716 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC19.91■□□□□ 0.78
E2F3O00716 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC19.91■□□□□ 0.78
E2F3O00716 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
E2F3O00716 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.91■□□□□ 0.78
E2F3O00716 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC19.91■□□□□ 0.78
E2F3O00716 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
E2F3O00716 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
E2F3O00716 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
E2F3O00716 AC092720.2-201ENST00000602388 1665 ntBASIC19.91■□□□□ 0.78
E2F3O00716 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
E2F3O00716 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
E2F3O00716 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC19.9■□□□□ 0.78
E2F3O00716 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
E2F3O00716 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
E2F3O00716 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.9■□□□□ 0.78
E2F3O00716 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.9■□□□□ 0.78
E2F3O00716 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
E2F3O00716 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.9■□□□□ 0.78
E2F3O00716 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC19.9■□□□□ 0.78
E2F3O00716 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
E2F3O00716 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC19.9■□□□□ 0.78
E2F3O00716 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
E2F3O00716 HSCB-202ENST00000398941 955 ntTSL 2 BASIC19.9■□□□□ 0.78
E2F3O00716 DBI-210ENST00000542275 757 ntTSL 5 BASIC19.9■□□□□ 0.78
E2F3O00716 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC19.9■□□□□ 0.78
E2F3O00716 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC19.9■□□□□ 0.78
E2F3O00716 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC19.9■□□□□ 0.78
E2F3O00716 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC19.9■□□□□ 0.78
E2F3O00716 GXYLT1P5-201ENST00000614548 1189 ntBASIC19.9■□□□□ 0.78
E2F3O00716 TFG-210ENST00000620299 1289 ntTSL 5 BASIC19.9■□□□□ 0.78
E2F3O00716 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
E2F3O00716 GAS2L1P2-201ENST00000436355 1356 ntBASIC19.9■□□□□ 0.78
E2F3O00716 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
E2F3O00716 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
E2F3O00716 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
E2F3O00716 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC19.9■□□□□ 0.78
E2F3O00716 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
E2F3O00716 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.9■□□□□ 0.78
E2F3O00716 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
E2F3O00716 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.78
E2F3O00716 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
E2F3O00716 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.89■□□□□ 0.78
E2F3O00716 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.78
E2F3O00716 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
E2F3O00716 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
E2F3O00716 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
E2F3O00716 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
E2F3O00716 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
E2F3O00716 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
E2F3O00716 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
E2F3O00716 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
E2F3O00716 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
E2F3O00716 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
E2F3O00716 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
E2F3O00716 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC19.89■□□□□ 0.77
E2F3O00716 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.89■□□□□ 0.77
E2F3O00716 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC19.89■□□□□ 0.77
E2F3O00716 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
E2F3O00716 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
E2F3O00716 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.89■□□□□ 0.77
E2F3O00716 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC19.89■□□□□ 0.77
E2F3O00716 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC19.89■□□□□ 0.77
E2F3O00716 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
E2F3O00716 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
E2F3O00716 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
E2F3O00716 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
E2F3O00716 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
E2F3O00716 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.88■□□□□ 0.77
E2F3O00716 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
E2F3O00716 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
E2F3O00716 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
E2F3O00716 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
E2F3O00716 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
E2F3O00716 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
E2F3O00716 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
E2F3O00716 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.88■□□□□ 0.77
E2F3O00716 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.88■□□□□ 0.77
E2F3O00716 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
E2F3O00716 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC19.88■□□□□ 0.77
E2F3O00716 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
E2F3O00716 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
E2F3O00716 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.88■□□□□ 0.77
E2F3O00716 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.88■□□□□ 0.77
E2F3O00716 UBE2DNL-204ENST00000602536 740 ntBASIC19.88■□□□□ 0.77
E2F3O00716 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
E2F3O00716 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.88■□□□□ 0.77
E2F3O00716 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
E2F3O00716 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
E2F3O00716 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
E2F3O00716 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
E2F3O00716 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC19.88■□□□□ 0.77
E2F3O00716 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.87■□□□□ 0.77
E2F3O00716 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
E2F3O00716 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC19.87■□□□□ 0.77
E2F3O00716 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC19.87■□□□□ 0.77
E2F3O00716 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
E2F3O00716 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC19.87■□□□□ 0.77
E2F3O00716 EMC9-206ENST00000560403 872 ntTSL 2 BASIC19.87■□□□□ 0.77
E2F3O00716 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms