Protein–RNA interactions for Protein: O00555

CACNA1A, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, humanhuman

Predictions only

Length 2,505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1AO00555 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
CACNA1AO00555 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC19.51■□□□□ 0.71
CACNA1AO00555 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC19.51■□□□□ 0.71
CACNA1AO00555 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC19.51■□□□□ 0.71
CACNA1AO00555 AC130371.2-201ENST00000619443 611 ntBASIC19.51■□□□□ 0.71
CACNA1AO00555 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CACNA1AO00555 AC022211.4-201ENST00000625094 2161 ntBASIC19.51■□□□□ 0.71
CACNA1AO00555 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC19.51■□□□□ 0.71
CACNA1AO00555 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC19.51■□□□□ 0.71
CACNA1AO00555 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC19.51■□□□□ 0.71
CACNA1AO00555 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC19.51■□□□□ 0.71
CACNA1AO00555 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CACNA1AO00555 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC19.5■□□□□ 0.71
CACNA1AO00555 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CACNA1AO00555 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC19.5■□□□□ 0.71
CACNA1AO00555 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CACNA1AO00555 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC19.5■□□□□ 0.71
CACNA1AO00555 AL138966.2-201ENST00000621997 464 ntBASIC19.5■□□□□ 0.71
CACNA1AO00555 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CACNA1AO00555 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
CACNA1AO00555 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CACNA1AO00555 THRA-202ENST00000394121 2260 ntTSL 2 BASIC19.5■□□□□ 0.71
CACNA1AO00555 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
CACNA1AO00555 FAAHP1-202ENST00000446499 1238 ntBASIC19.5■□□□□ 0.71
CACNA1AO00555 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CACNA1AO00555 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CACNA1AO00555 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CACNA1AO00555 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC19.49■□□□□ 0.71
CACNA1AO00555 NIFKP9-201ENST00000419265 221 ntBASIC19.49■□□□□ 0.71
CACNA1AO00555 AC009078.2-202ENST00000463353 338 ntBASIC19.49■□□□□ 0.71
CACNA1AO00555 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC19.49■□□□□ 0.71
CACNA1AO00555 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC19.49■□□□□ 0.71
CACNA1AO00555 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CACNA1AO00555 AC007322.3-201ENST00000426526 701 ntBASIC19.49■□□□□ 0.71
CACNA1AO00555 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC19.49■□□□□ 0.71
CACNA1AO00555 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC19.49■□□□□ 0.71
CACNA1AO00555 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CACNA1AO00555 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC19.49■□□□□ 0.71
CACNA1AO00555 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC19.49■□□□□ 0.71
CACNA1AO00555 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CACNA1AO00555 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
CACNA1AO00555 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC19.48■□□□□ 0.71
CACNA1AO00555 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CACNA1AO00555 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CACNA1AO00555 HMGA1P5-201ENST00000412453 271 ntBASIC19.48■□□□□ 0.71
CACNA1AO00555 CKBP1-201ENST00000565489 1086 ntBASIC19.48■□□□□ 0.71
CACNA1AO00555 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
CACNA1AO00555 CYP21A1P-202ENST00000354927 1481 ntBASIC19.48■□□□□ 0.71
CACNA1AO00555 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
CACNA1AO00555 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CACNA1AO00555 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC19.48■□□□□ 0.71
CACNA1AO00555 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC19.48■□□□□ 0.71
CACNA1AO00555 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC19.48■□□□□ 0.71
CACNA1AO00555 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC19.48■□□□□ 0.71
CACNA1AO00555 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CACNA1AO00555 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
CACNA1AO00555 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CACNA1AO00555 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
CACNA1AO00555 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.47■□□□□ 0.71
CACNA1AO00555 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CACNA1AO00555 AC011558.1-201ENST00000623459 338 ntBASIC19.47■□□□□ 0.71
CACNA1AO00555 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC19.47■□□□□ 0.71
CACNA1AO00555 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CACNA1AO00555 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC19.47■□□□□ 0.71
CACNA1AO00555 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC19.47■□□□□ 0.71
CACNA1AO00555 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC19.47■□□□□ 0.71
CACNA1AO00555 PGM5P4-201ENST00000421970 445 ntBASIC19.47■□□□□ 0.71
CACNA1AO00555 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC19.47■□□□□ 0.71
CACNA1AO00555 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC19.47■□□□□ 0.71
CACNA1AO00555 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC19.47■□□□□ 0.71
CACNA1AO00555 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC19.47■□□□□ 0.71
CACNA1AO00555 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC19.47■□□□□ 0.71
CACNA1AO00555 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.46■□□□□ 0.71
CACNA1AO00555 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
CACNA1AO00555 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC19.46■□□□□ 0.71
CACNA1AO00555 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CACNA1AO00555 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CACNA1AO00555 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CACNA1AO00555 KRT16P1-201ENST00000399124 1418 ntBASIC19.46■□□□□ 0.71
CACNA1AO00555 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CACNA1AO00555 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CACNA1AO00555 MESTP1-201ENST00000404287 994 ntBASIC19.46■□□□□ 0.71
CACNA1AO00555 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC19.46■□□□□ 0.71
CACNA1AO00555 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC19.46■□□□□ 0.71
CACNA1AO00555 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
CACNA1AO00555 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
CACNA1AO00555 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
CACNA1AO00555 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC19.46■□□□□ 0.71
CACNA1AO00555 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CACNA1AO00555 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC19.46■□□□□ 0.71
CACNA1AO00555 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CACNA1AO00555 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CACNA1AO00555 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CACNA1AO00555 FAM220CP-201ENST00000395253 831 ntBASIC19.45■□□□□ 0.7
CACNA1AO00555 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC19.45■□□□□ 0.7
CACNA1AO00555 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CACNA1AO00555 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC19.45■□□□□ 0.7
CACNA1AO00555 INGX-201ENST00000359239 846 ntBASIC19.45■□□□□ 0.7
CACNA1AO00555 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CACNA1AO00555 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms