Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
O00370 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
O00370 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC21.77■■□□□ 1.08
O00370 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
O00370 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
O00370 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
O00370 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC21.77■■□□□ 1.08
O00370 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
O00370 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC21.77■■□□□ 1.08
O00370 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC21.77■■□□□ 1.08
O00370 AC133552.2-202ENST00000575694 574 ntBASIC21.77■■□□□ 1.08
O00370 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
O00370 OR10C1-204ENST00000622521 1039 ntBASIC21.77■■□□□ 1.08
O00370 FEM1AP1-201ENST00000431297 1995 ntBASIC21.77■■□□□ 1.08
O00370 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC21.77■■□□□ 1.08
O00370 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC21.77■■□□□ 1.08
O00370 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC21.77■■□□□ 1.08
O00370 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
O00370 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.07
O00370 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
O00370 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
O00370 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
O00370 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
O00370 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
O00370 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC21.76■■□□□ 1.07
O00370 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
O00370 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
O00370 AC090192.1-201ENST00000517740 490 ntBASIC21.76■■□□□ 1.07
O00370 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
O00370 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC21.76■■□□□ 1.07
O00370 ME2-216ENST00000639850 2331 ntTSL 5 BASIC21.76■■□□□ 1.07
O00370 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
O00370 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
O00370 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC21.76■■□□□ 1.07
O00370 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC21.76■■□□□ 1.07
O00370 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
O00370 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
O00370 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
O00370 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
O00370 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
O00370 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
O00370 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC21.75■■□□□ 1.07
O00370 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
O00370 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
O00370 AC006970.2-201ENST00000450065 779 ntBASIC21.75■■□□□ 1.07
O00370 AC093787.1-201ENST00000450396 207 ntBASIC21.75■■□□□ 1.07
O00370 PPP1R14BP3-201ENST00000509033 445 ntBASIC21.75■■□□□ 1.07
O00370 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC21.75■■□□□ 1.07
O00370 AC008694.1-202ENST00000636953 945 ntBASIC21.75■■□□□ 1.07
O00370 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
O00370 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
O00370 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC21.75■■□□□ 1.07
O00370 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC21.75■■□□□ 1.07
O00370 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
O00370 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
O00370 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
O00370 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
O00370 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
O00370 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
O00370 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC21.75■■□□□ 1.07
O00370 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
O00370 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
O00370 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
O00370 CYP21A1P-202ENST00000354927 1481 ntBASIC21.74■■□□□ 1.07
O00370 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC21.74■■□□□ 1.07
O00370 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
O00370 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
O00370 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
O00370 LINC01521-201ENST00000504184 1943 ntBASIC21.74■■□□□ 1.07
O00370 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
O00370 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
O00370 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
O00370 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC21.74■■□□□ 1.07
O00370 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC21.74■■□□□ 1.07
O00370 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC21.74■■□□□ 1.07
O00370 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
O00370 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
O00370 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
O00370 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
O00370 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
O00370 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC21.73■■□□□ 1.07
O00370 AC100791.3-201ENST00000617619 330 ntBASIC21.73■■□□□ 1.07
O00370 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
O00370 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
O00370 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
O00370 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
O00370 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
O00370 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
O00370 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
O00370 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC21.72■■□□□ 1.07
O00370 AC073314.1-201ENST00000568729 2216 ntBASIC21.72■■□□□ 1.07
O00370 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
O00370 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC21.72■■□□□ 1.07
O00370 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
O00370 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
O00370 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC21.72■■□□□ 1.07
O00370 AL512625.2-201ENST00000417533 625 ntBASIC21.72■■□□□ 1.07
O00370 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
O00370 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC21.72■■□□□ 1.07
O00370 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms