Protein–RNA interactions for Protein: H3BM21

Integrin beta (Fragment), humanhuman

Predictions only

Length 787 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3BM21 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
H3BM21 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
H3BM21 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC20.32■□□□□ 0.84
H3BM21 NME6-213ENST00000451657 871 ntTSL 2 BASIC20.32■□□□□ 0.84
H3BM21 HES2-205ENST00000487437 968 ntTSL 3 BASIC20.32■□□□□ 0.84
H3BM21 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
H3BM21 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC20.32■□□□□ 0.84
H3BM21 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
H3BM21 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
H3BM21 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
H3BM21 AC005229.4-201ENST00000610085 2198 ntBASIC20.32■□□□□ 0.84
H3BM21 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
H3BM21 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
H3BM21 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
H3BM21 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
H3BM21 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
H3BM21 VMO1-204ENST00000441199 741 ntTSL 2 BASIC20.31■□□□□ 0.84
H3BM21 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC20.31■□□□□ 0.84
H3BM21 UNC93B5-201ENST00000530315 699 ntBASIC20.31■□□□□ 0.84
H3BM21 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
H3BM21 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
H3BM21 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.31■□□□□ 0.84
H3BM21 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
H3BM21 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
H3BM21 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
H3BM21 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
H3BM21 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.31■□□□□ 0.84
H3BM21 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
H3BM21 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20.3■□□□□ 0.84
H3BM21 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
H3BM21 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC20.3■□□□□ 0.84
H3BM21 KRT18P68-201ENST00000392293 1000 ntBASIC20.3■□□□□ 0.84
H3BM21 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC20.3■□□□□ 0.84
H3BM21 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC20.3■□□□□ 0.84
H3BM21 GATS-209ENST00000454084 1030 ntTSL 3 BASIC20.3■□□□□ 0.84
H3BM21 AC026366.1-201ENST00000488803 879 ntBASIC20.3■□□□□ 0.84
H3BM21 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC20.3■□□□□ 0.84
H3BM21 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
H3BM21 AP003097.1-201ENST00000530657 1135 ntBASIC20.3■□□□□ 0.84
H3BM21 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
H3BM21 MMAB-206ENST00000540016 945 ntTSL 3 BASIC20.3■□□□□ 0.84
H3BM21 DET1-205ENST00000558413 583 ntTSL 4 BASIC20.3■□□□□ 0.84
H3BM21 AC006058.3-201ENST00000606217 1069 ntBASIC20.3■□□□□ 0.84
H3BM21 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
H3BM21 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
H3BM21 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
H3BM21 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
H3BM21 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
H3BM21 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
H3BM21 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
H3BM21 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
H3BM21 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
H3BM21 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
H3BM21 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
H3BM21 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
H3BM21 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
H3BM21 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
H3BM21 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC20.29■□□□□ 0.84
H3BM21 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
H3BM21 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
H3BM21 AC093827.2-201ENST00000512654 315 ntBASIC20.29■□□□□ 0.84
H3BM21 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC20.29■□□□□ 0.84
H3BM21 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC20.29■□□□□ 0.84
H3BM21 AC060766.5-201ENST00000590539 871 ntBASIC20.29■□□□□ 0.84
H3BM21 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
H3BM21 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
H3BM21 AL137060.1-201ENST00000618151 2648 ntBASIC20.29■□□□□ 0.84
H3BM21 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
H3BM21 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
H3BM21 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
H3BM21 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
H3BM21 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
H3BM21 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.29■□□□□ 0.84
H3BM21 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
H3BM21 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.28■□□□□ 0.84
H3BM21 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
H3BM21 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
H3BM21 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
H3BM21 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
H3BM21 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
H3BM21 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
H3BM21 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC20.28■□□□□ 0.84
H3BM21 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
H3BM21 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
H3BM21 HLA-B-256ENST00000639848 1089 ntBASIC20.28■□□□□ 0.84
H3BM21 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
H3BM21 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.28■□□□□ 0.84
H3BM21 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
H3BM21 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
H3BM21 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
H3BM21 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
H3BM21 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.27■□□□□ 0.84
H3BM21 AC116050.2-201ENST00000612102 1779 ntBASIC20.27■□□□□ 0.84
H3BM21 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
H3BM21 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC20.27■□□□□ 0.84
H3BM21 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
H3BM21 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
H3BM21 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
H3BM21 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.27■□□□□ 0.84
H3BM21 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms