Protein–RNA interactions for Protein: E7ERA6

RNF223, RING finger protein 223, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF223E7ERA6 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC17■□□□□ 0.31
RNF223E7ERA6 AL355075.4-201ENST00000554988 638 ntBASIC17■□□□□ 0.31
RNF223E7ERA6 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC17■□□□□ 0.31
RNF223E7ERA6 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC17■□□□□ 0.31
RNF223E7ERA6 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC17■□□□□ 0.31
RNF223E7ERA6 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC17■□□□□ 0.31
RNF223E7ERA6 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RNF223E7ERA6 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
RNF223E7ERA6 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
RNF223E7ERA6 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RNF223E7ERA6 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
RNF223E7ERA6 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC16.99■□□□□ 0.31
RNF223E7ERA6 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RNF223E7ERA6 C1orf229-201ENST00000623686 2258 ntBASIC16.99■□□□□ 0.31
RNF223E7ERA6 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RNF223E7ERA6 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RNF223E7ERA6 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RNF223E7ERA6 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC16.99■□□□□ 0.31
RNF223E7ERA6 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC16.99■□□□□ 0.31
RNF223E7ERA6 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC16.99■□□□□ 0.31
RNF223E7ERA6 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
RNF223E7ERA6 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RNF223E7ERA6 RER1-204ENST00000378518 522 ntTSL 3 BASIC16.99■□□□□ 0.31
RNF223E7ERA6 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RNF223E7ERA6 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC16.99■□□□□ 0.31
RNF223E7ERA6 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC16.99■□□□□ 0.31
RNF223E7ERA6 PENK-204ENST00000518770 863 ntTSL 2 BASIC16.99■□□□□ 0.31
RNF223E7ERA6 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC16.99■□□□□ 0.31
RNF223E7ERA6 RN7SL602P-201ENST00000578326 324 ntBASIC16.99■□□□□ 0.31
RNF223E7ERA6 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
RNF223E7ERA6 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RNF223E7ERA6 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RNF223E7ERA6 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RNF223E7ERA6 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RNF223E7ERA6 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RNF223E7ERA6 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC16.98■□□□□ 0.31
RNF223E7ERA6 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RNF223E7ERA6 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
RNF223E7ERA6 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC16.98■□□□□ 0.31
RNF223E7ERA6 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
RNF223E7ERA6 AC127496.7-201ENST00000625110 1798 ntBASIC16.98■□□□□ 0.31
RNF223E7ERA6 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
RNF223E7ERA6 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC16.98■□□□□ 0.31
RNF223E7ERA6 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RNF223E7ERA6 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC16.98■□□□□ 0.31
RNF223E7ERA6 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC16.98■□□□□ 0.31
RNF223E7ERA6 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC16.98■□□□□ 0.31
RNF223E7ERA6 TK2-213ENST00000563369 882 ntTSL 5 BASIC16.98■□□□□ 0.31
RNF223E7ERA6 RARRES2P10-201ENST00000564312 460 ntBASIC16.98■□□□□ 0.31
RNF223E7ERA6 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
RNF223E7ERA6 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
RNF223E7ERA6 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RNF223E7ERA6 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC16.98■□□□□ 0.31
RNF223E7ERA6 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC16.98■□□□□ 0.31
RNF223E7ERA6 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC16.98■□□□□ 0.31
RNF223E7ERA6 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC16.98■□□□□ 0.31
RNF223E7ERA6 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC16.98■□□□□ 0.31
RNF223E7ERA6 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
RNF223E7ERA6 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RNF223E7ERA6 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RNF223E7ERA6 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
RNF223E7ERA6 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RNF223E7ERA6 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RNF223E7ERA6 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RNF223E7ERA6 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
RNF223E7ERA6 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
RNF223E7ERA6 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RNF223E7ERA6 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
RNF223E7ERA6 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC16.97■□□□□ 0.31
RNF223E7ERA6 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC16.97■□□□□ 0.31
RNF223E7ERA6 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC16.97■□□□□ 0.31
RNF223E7ERA6 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC16.97■□□□□ 0.31
RNF223E7ERA6 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RNF223E7ERA6 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC16.97■□□□□ 0.31
RNF223E7ERA6 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC16.97■□□□□ 0.31
RNF223E7ERA6 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC16.97■□□□□ 0.31
RNF223E7ERA6 SNX21-213ENST00000614929 587 ntTSL 5 BASIC16.97■□□□□ 0.31
RNF223E7ERA6 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
RNF223E7ERA6 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC16.97■□□□□ 0.31
RNF223E7ERA6 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RNF223E7ERA6 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
RNF223E7ERA6 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RNF223E7ERA6 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC16.97■□□□□ 0.31
RNF223E7ERA6 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC16.97■□□□□ 0.31
RNF223E7ERA6 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RNF223E7ERA6 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RNF223E7ERA6 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC16.97■□□□□ 0.31
RNF223E7ERA6 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
RNF223E7ERA6 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RNF223E7ERA6 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
RNF223E7ERA6 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RNF223E7ERA6 MOK-233ENST00000524214 1539 ntTSL 2 BASIC16.96■□□□□ 0.31
RNF223E7ERA6 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
RNF223E7ERA6 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RNF223E7ERA6 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RNF223E7ERA6 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
RNF223E7ERA6 RCN1P1-201ENST00000400413 996 ntBASIC16.96■□□□□ 0.31
RNF223E7ERA6 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC16.96■□□□□ 0.31
RNF223E7ERA6 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
RNF223E7ERA6 PPOX-219ENST00000544598 813 ntTSL 2 BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms