Protein–RNA interactions for Protein: A6NFA1

TRABD2B, Metalloprotease TIKI2, humanhuman

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRABD2BA6NFA1 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRABD2BA6NFA1 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TRABD2BA6NFA1 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRABD2BA6NFA1 PRKY-204ENST00000533551 1019 ntBASIC19.65■□□□□ 0.74
TRABD2BA6NFA1 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC19.65■□□□□ 0.74
TRABD2BA6NFA1 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
TRABD2BA6NFA1 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
TRABD2BA6NFA1 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRABD2BA6NFA1 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRABD2BA6NFA1 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TRABD2BA6NFA1 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC19.65■□□□□ 0.74
TRABD2BA6NFA1 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
TRABD2BA6NFA1 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
TRABD2BA6NFA1 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC19.65■□□□□ 0.74
TRABD2BA6NFA1 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
TRABD2BA6NFA1 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRABD2BA6NFA1 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TRABD2BA6NFA1 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRABD2BA6NFA1 AC003102.1-202ENST00000563394 1796 ntBASIC19.65■□□□□ 0.74
TRABD2BA6NFA1 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRABD2BA6NFA1 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.64■□□□□ 0.74
TRABD2BA6NFA1 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
TRABD2BA6NFA1 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
TRABD2BA6NFA1 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.64■□□□□ 0.74
TRABD2BA6NFA1 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
TRABD2BA6NFA1 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.64■□□□□ 0.74
TRABD2BA6NFA1 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
TRABD2BA6NFA1 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
TRABD2BA6NFA1 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TRABD2BA6NFA1 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TRABD2BA6NFA1 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRABD2BA6NFA1 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TRABD2BA6NFA1 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRABD2BA6NFA1 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRABD2BA6NFA1 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC19.64■□□□□ 0.73
TRABD2BA6NFA1 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRABD2BA6NFA1 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRABD2BA6NFA1 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRABD2BA6NFA1 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRABD2BA6NFA1 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TRABD2BA6NFA1 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRABD2BA6NFA1 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRABD2BA6NFA1 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TRABD2BA6NFA1 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRABD2BA6NFA1 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRABD2BA6NFA1 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
TRABD2BA6NFA1 KRASP1-201ENST00000407852 552 ntBASIC19.63■□□□□ 0.73
TRABD2BA6NFA1 AC007322.3-201ENST00000426526 701 ntBASIC19.63■□□□□ 0.73
TRABD2BA6NFA1 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC19.63■□□□□ 0.73
TRABD2BA6NFA1 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC19.63■□□□□ 0.73
TRABD2BA6NFA1 PENK-204ENST00000518770 863 ntTSL 2 BASIC19.63■□□□□ 0.73
TRABD2BA6NFA1 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TRABD2BA6NFA1 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC19.63■□□□□ 0.73
TRABD2BA6NFA1 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC19.63■□□□□ 0.73
TRABD2BA6NFA1 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRABD2BA6NFA1 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
TRABD2BA6NFA1 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC19.63■□□□□ 0.73
TRABD2BA6NFA1 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC19.63■□□□□ 0.73
TRABD2BA6NFA1 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TRABD2BA6NFA1 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC19.63■□□□□ 0.73
TRABD2BA6NFA1 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
TRABD2BA6NFA1 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
TRABD2BA6NFA1 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRABD2BA6NFA1 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC19.62■□□□□ 0.73
TRABD2BA6NFA1 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
TRABD2BA6NFA1 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRABD2BA6NFA1 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
TRABD2BA6NFA1 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TRABD2BA6NFA1 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TRABD2BA6NFA1 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TRABD2BA6NFA1 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TRABD2BA6NFA1 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TRABD2BA6NFA1 AC120498.8-201ENST00000614275 531 ntBASIC19.62■□□□□ 0.73
TRABD2BA6NFA1 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TRABD2BA6NFA1 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC19.62■□□□□ 0.73
TRABD2BA6NFA1 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TRABD2BA6NFA1 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRABD2BA6NFA1 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TRABD2BA6NFA1 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRABD2BA6NFA1 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRABD2BA6NFA1 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC19.61■□□□□ 0.73
TRABD2BA6NFA1 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRABD2BA6NFA1 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRABD2BA6NFA1 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC19.61■□□□□ 0.73
TRABD2BA6NFA1 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRABD2BA6NFA1 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.61■□□□□ 0.73
TRABD2BA6NFA1 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
TRABD2BA6NFA1 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TRABD2BA6NFA1 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC19.61■□□□□ 0.73
TRABD2BA6NFA1 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRABD2BA6NFA1 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC19.61■□□□□ 0.73
TRABD2BA6NFA1 RARRES2P10-201ENST00000564312 460 ntBASIC19.61■□□□□ 0.73
TRABD2BA6NFA1 AL049597.2-201ENST00000565575 961 ntBASIC19.61■□□□□ 0.73
TRABD2BA6NFA1 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC19.61■□□□□ 0.73
TRABD2BA6NFA1 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC19.61■□□□□ 0.73
TRABD2BA6NFA1 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
TRABD2BA6NFA1 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC19.61■□□□□ 0.73
TRABD2BA6NFA1 AL590326.2-201ENST00000625139 305 ntBASIC19.61■□□□□ 0.73
TRABD2BA6NFA1 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRABD2BA6NFA1 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms