Protein–RNA interactions for Protein: A6NDR6

MEIS3P1, Putative homeobox protein Meis3-like 1, humanhuman

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3P1A6NDR6 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
MEIS3P1A6NDR6 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
MEIS3P1A6NDR6 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
MEIS3P1A6NDR6 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
MEIS3P1A6NDR6 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
MEIS3P1A6NDR6 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC17.46■□□□□ 0.39
MEIS3P1A6NDR6 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
MEIS3P1A6NDR6 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
MEIS3P1A6NDR6 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
MEIS3P1A6NDR6 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC17.46■□□□□ 0.39
MEIS3P1A6NDR6 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC17.46■□□□□ 0.39
MEIS3P1A6NDR6 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC17.46■□□□□ 0.39
MEIS3P1A6NDR6 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
MEIS3P1A6NDR6 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
MEIS3P1A6NDR6 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
MEIS3P1A6NDR6 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
MEIS3P1A6NDR6 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
MEIS3P1A6NDR6 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
MEIS3P1A6NDR6 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
MEIS3P1A6NDR6 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC17.46■□□□□ 0.39
MEIS3P1A6NDR6 AC092720.2-201ENST00000602388 1665 ntBASIC17.45■□□□□ 0.38
MEIS3P1A6NDR6 EXOC3-AS1-202ENST00000623673 1663 ntBASIC17.45■□□□□ 0.38
MEIS3P1A6NDR6 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC17.45■□□□□ 0.38
MEIS3P1A6NDR6 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC17.45■□□□□ 0.38
MEIS3P1A6NDR6 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
MEIS3P1A6NDR6 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
MEIS3P1A6NDR6 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
MEIS3P1A6NDR6 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
MEIS3P1A6NDR6 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
MEIS3P1A6NDR6 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
MEIS3P1A6NDR6 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.45■□□□□ 0.38
MEIS3P1A6NDR6 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
MEIS3P1A6NDR6 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
MEIS3P1A6NDR6 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
MEIS3P1A6NDR6 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC17.45■□□□□ 0.38
MEIS3P1A6NDR6 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
MEIS3P1A6NDR6 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.45■□□□□ 0.38
MEIS3P1A6NDR6 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
MEIS3P1A6NDR6 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
MEIS3P1A6NDR6 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
MEIS3P1A6NDR6 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.45■□□□□ 0.38
MEIS3P1A6NDR6 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
MEIS3P1A6NDR6 AC125437.2-201ENST00000625180 2167 ntBASIC17.45■□□□□ 0.38
MEIS3P1A6NDR6 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
MEIS3P1A6NDR6 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
MEIS3P1A6NDR6 AC020763.4-201ENST00000623414 4170 ntBASIC17.44■□□□□ 0.38
MEIS3P1A6NDR6 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
MEIS3P1A6NDR6 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC17.44■□□□□ 0.38
MEIS3P1A6NDR6 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
MEIS3P1A6NDR6 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
MEIS3P1A6NDR6 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
MEIS3P1A6NDR6 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC17.44■□□□□ 0.38
MEIS3P1A6NDR6 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
MEIS3P1A6NDR6 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC17.44■□□□□ 0.38
MEIS3P1A6NDR6 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
MEIS3P1A6NDR6 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
MEIS3P1A6NDR6 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC17.44■□□□□ 0.38
MEIS3P1A6NDR6 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
MEIS3P1A6NDR6 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC17.44■□□□□ 0.38
MEIS3P1A6NDR6 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC17.44■□□□□ 0.38
MEIS3P1A6NDR6 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC17.44■□□□□ 0.38
MEIS3P1A6NDR6 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC17.44■□□□□ 0.38
MEIS3P1A6NDR6 AL512631.2-201ENST00000604634 923 ntBASIC17.44■□□□□ 0.38
MEIS3P1A6NDR6 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC17.44■□□□□ 0.38
MEIS3P1A6NDR6 AC136469.2-201ENST00000623944 1028 ntBASIC17.44■□□□□ 0.38
MEIS3P1A6NDR6 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
MEIS3P1A6NDR6 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
MEIS3P1A6NDR6 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
MEIS3P1A6NDR6 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
MEIS3P1A6NDR6 AC011484.1-201ENST00000377652 1995 ntBASIC17.44■□□□□ 0.38
MEIS3P1A6NDR6 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
MEIS3P1A6NDR6 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC17.44■□□□□ 0.38
MEIS3P1A6NDR6 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
MEIS3P1A6NDR6 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
MEIS3P1A6NDR6 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
MEIS3P1A6NDR6 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
MEIS3P1A6NDR6 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
MEIS3P1A6NDR6 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.43■□□□□ 0.38
MEIS3P1A6NDR6 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
MEIS3P1A6NDR6 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
MEIS3P1A6NDR6 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
MEIS3P1A6NDR6 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
MEIS3P1A6NDR6 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
MEIS3P1A6NDR6 OR2A1-AS1-204ENST00000470435 602 ntBASIC17.43■□□□□ 0.38
MEIS3P1A6NDR6 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
MEIS3P1A6NDR6 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
MEIS3P1A6NDR6 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
MEIS3P1A6NDR6 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
MEIS3P1A6NDR6 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
MEIS3P1A6NDR6 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.43■□□□□ 0.38
MEIS3P1A6NDR6 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
MEIS3P1A6NDR6 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
MEIS3P1A6NDR6 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
MEIS3P1A6NDR6 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
MEIS3P1A6NDR6 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MEIS3P1A6NDR6 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC17.42■□□□□ 0.38
MEIS3P1A6NDR6 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MEIS3P1A6NDR6 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC17.42■□□□□ 0.38
MEIS3P1A6NDR6 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MEIS3P1A6NDR6 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms