Protein–RNA interactions for Protein: A4FU28

CTAGE9, cTAGE family member 9, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTAGE9A4FU28 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
CTAGE9A4FU28 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CTAGE9A4FU28 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
CTAGE9A4FU28 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC21.77■■□□□ 1.08
CTAGE9A4FU28 AC011298.3-201ENST00000615796 283 ntBASIC21.77■■□□□ 1.08
CTAGE9A4FU28 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC21.77■■□□□ 1.08
CTAGE9A4FU28 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC21.77■■□□□ 1.08
CTAGE9A4FU28 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CTAGE9A4FU28 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CTAGE9A4FU28 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
CTAGE9A4FU28 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC21.77■■□□□ 1.07
CTAGE9A4FU28 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC21.76■■□□□ 1.07
CTAGE9A4FU28 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC21.76■■□□□ 1.07
CTAGE9A4FU28 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC21.76■■□□□ 1.07
CTAGE9A4FU28 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC21.76■■□□□ 1.07
CTAGE9A4FU28 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CTAGE9A4FU28 FXN-202ENST00000396364 980 ntTSL 5 BASIC21.76■■□□□ 1.07
CTAGE9A4FU28 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CTAGE9A4FU28 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CTAGE9A4FU28 RNF146-206ENST00000480444 843 ntTSL 2 BASIC21.76■■□□□ 1.07
CTAGE9A4FU28 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
CTAGE9A4FU28 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC21.76■■□□□ 1.07
CTAGE9A4FU28 DUX4L19-201ENST00000557448 1267 ntBASIC21.76■■□□□ 1.07
CTAGE9A4FU28 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CTAGE9A4FU28 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC21.76■■□□□ 1.07
CTAGE9A4FU28 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC21.76■■□□□ 1.07
CTAGE9A4FU28 AP000974.1-201ENST00000623909 2387 ntBASIC21.76■■□□□ 1.07
CTAGE9A4FU28 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
CTAGE9A4FU28 LBX2-AS1-202ENST00000603175 2083 ntBASIC21.76■■□□□ 1.07
CTAGE9A4FU28 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CTAGE9A4FU28 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC21.76■■□□□ 1.07
CTAGE9A4FU28 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CTAGE9A4FU28 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
CTAGE9A4FU28 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
CTAGE9A4FU28 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CTAGE9A4FU28 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CTAGE9A4FU28 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
CTAGE9A4FU28 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CTAGE9A4FU28 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
CTAGE9A4FU28 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
CTAGE9A4FU28 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CTAGE9A4FU28 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CTAGE9A4FU28 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC21.75■■□□□ 1.07
CTAGE9A4FU28 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
CTAGE9A4FU28 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
CTAGE9A4FU28 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC21.75■■□□□ 1.07
CTAGE9A4FU28 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CTAGE9A4FU28 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CTAGE9A4FU28 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC21.75■■□□□ 1.07
CTAGE9A4FU28 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CTAGE9A4FU28 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CTAGE9A4FU28 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CTAGE9A4FU28 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
CTAGE9A4FU28 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC21.74■■□□□ 1.07
CTAGE9A4FU28 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC21.74■■□□□ 1.07
CTAGE9A4FU28 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC21.74■■□□□ 1.07
CTAGE9A4FU28 SNX3-202ENST00000349379 890 ntTSL 2 BASIC21.74■■□□□ 1.07
CTAGE9A4FU28 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CTAGE9A4FU28 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC21.74■■□□□ 1.07
CTAGE9A4FU28 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC21.74■■□□□ 1.07
CTAGE9A4FU28 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC21.74■■□□□ 1.07
CTAGE9A4FU28 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC21.74■■□□□ 1.07
CTAGE9A4FU28 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC21.74■■□□□ 1.07
CTAGE9A4FU28 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC21.74■■□□□ 1.07
CTAGE9A4FU28 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CTAGE9A4FU28 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
CTAGE9A4FU28 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CTAGE9A4FU28 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC21.74■■□□□ 1.07
CTAGE9A4FU28 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
CTAGE9A4FU28 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CTAGE9A4FU28 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CTAGE9A4FU28 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CTAGE9A4FU28 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CTAGE9A4FU28 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CTAGE9A4FU28 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CTAGE9A4FU28 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CTAGE9A4FU28 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CTAGE9A4FU28 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
CTAGE9A4FU28 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CTAGE9A4FU28 MIR4466-201ENST00000606121 54 ntBASIC21.73■■□□□ 1.07
CTAGE9A4FU28 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC21.73■■□□□ 1.07
CTAGE9A4FU28 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CTAGE9A4FU28 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CTAGE9A4FU28 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
CTAGE9A4FU28 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CTAGE9A4FU28 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC21.72■■□□□ 1.07
CTAGE9A4FU28 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CTAGE9A4FU28 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
CTAGE9A4FU28 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
CTAGE9A4FU28 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC21.72■■□□□ 1.07
CTAGE9A4FU28 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC21.72■■□□□ 1.07
CTAGE9A4FU28 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC21.72■■□□□ 1.07
CTAGE9A4FU28 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
CTAGE9A4FU28 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CTAGE9A4FU28 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
CTAGE9A4FU28 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
CTAGE9A4FU28 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CTAGE9A4FU28 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CTAGE9A4FU28 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
CTAGE9A4FU28 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms