Protein–RNA interactions for Protein: A0A1B0GX49

TRBV6-4, T-cell receptor beta variable 6-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-4A0A1B0GX49 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRBV6-4A0A1B0GX49 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
TRBV6-4A0A1B0GX49 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC14.41□□□□□ -0.1
TRBV6-4A0A1B0GX49 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRBV6-4A0A1B0GX49 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC14.41□□□□□ -0.1
TRBV6-4A0A1B0GX49 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TRBV6-4A0A1B0GX49 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
TRBV6-4A0A1B0GX49 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRBV6-4A0A1B0GX49 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TRBV6-4A0A1B0GX49 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TRBV6-4A0A1B0GX49 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
TRBV6-4A0A1B0GX49 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRBV6-4A0A1B0GX49 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TRBV6-4A0A1B0GX49 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC14.4□□□□□ -0.1
TRBV6-4A0A1B0GX49 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TRBV6-4A0A1B0GX49 TERF1P5-201ENST00000477545 1207 ntBASIC14.4□□□□□ -0.1
TRBV6-4A0A1B0GX49 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC14.4□□□□□ -0.1
TRBV6-4A0A1B0GX49 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TRBV6-4A0A1B0GX49 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC14.4□□□□□ -0.1
TRBV6-4A0A1B0GX49 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC14.4□□□□□ -0.1
TRBV6-4A0A1B0GX49 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
TRBV6-4A0A1B0GX49 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TRBV6-4A0A1B0GX49 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
TRBV6-4A0A1B0GX49 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRBV6-4A0A1B0GX49 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TRBV6-4A0A1B0GX49 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRBV6-4A0A1B0GX49 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC14.4□□□□□ -0.1
TRBV6-4A0A1B0GX49 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
TRBV6-4A0A1B0GX49 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
TRBV6-4A0A1B0GX49 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRBV6-4A0A1B0GX49 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRBV6-4A0A1B0GX49 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC14.4□□□□□ -0.1
TRBV6-4A0A1B0GX49 DET1-207ENST00000564406 2315 ntTSL 2 BASIC14.4□□□□□ -0.11
TRBV6-4A0A1B0GX49 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TRBV6-4A0A1B0GX49 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRBV6-4A0A1B0GX49 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRBV6-4A0A1B0GX49 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRBV6-4A0A1B0GX49 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC14.39□□□□□ -0.11
TRBV6-4A0A1B0GX49 AC073130.3-201ENST00000624389 2278 ntBASIC14.39□□□□□ -0.11
TRBV6-4A0A1B0GX49 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TRBV6-4A0A1B0GX49 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TRBV6-4A0A1B0GX49 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
TRBV6-4A0A1B0GX49 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC14.39□□□□□ -0.11
TRBV6-4A0A1B0GX49 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC14.39□□□□□ -0.11
TRBV6-4A0A1B0GX49 DBI-210ENST00000542275 757 ntTSL 5 BASIC14.39□□□□□ -0.11
TRBV6-4A0A1B0GX49 AL162412.1-201ENST00000567129 965 ntBASIC14.39□□□□□ -0.11
TRBV6-4A0A1B0GX49 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC14.39□□□□□ -0.11
TRBV6-4A0A1B0GX49 AL591742.1-201ENST00000604433 565 ntBASIC14.39□□□□□ -0.11
TRBV6-4A0A1B0GX49 AC010536.3-201ENST00000620306 533 ntBASIC14.39□□□□□ -0.11
TRBV6-4A0A1B0GX49 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC14.39□□□□□ -0.11
TRBV6-4A0A1B0GX49 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TRBV6-4A0A1B0GX49 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRBV6-4A0A1B0GX49 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC14.39□□□□□ -0.11
TRBV6-4A0A1B0GX49 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
TRBV6-4A0A1B0GX49 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC14.39□□□□□ -0.11
TRBV6-4A0A1B0GX49 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC14.39□□□□□ -0.11
TRBV6-4A0A1B0GX49 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRBV6-4A0A1B0GX49 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
TRBV6-4A0A1B0GX49 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC14.39□□□□□ -0.11
TRBV6-4A0A1B0GX49 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
TRBV6-4A0A1B0GX49 AL121603.2-201ENST00000557373 2117 ntBASIC14.39□□□□□ -0.11
TRBV6-4A0A1B0GX49 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC14.39□□□□□ -0.11
TRBV6-4A0A1B0GX49 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TRBV6-4A0A1B0GX49 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRBV6-4A0A1B0GX49 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC14.39□□□□□ -0.11
TRBV6-4A0A1B0GX49 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRBV6-4A0A1B0GX49 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
TRBV6-4A0A1B0GX49 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRBV6-4A0A1B0GX49 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC14.38□□□□□ -0.11
TRBV6-4A0A1B0GX49 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRBV6-4A0A1B0GX49 STX6-204ENST00000542060 4809 ntTSL 2 BASIC14.38□□□□□ -0.11
TRBV6-4A0A1B0GX49 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TRBV6-4A0A1B0GX49 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRBV6-4A0A1B0GX49 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRBV6-4A0A1B0GX49 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC14.38□□□□□ -0.11
TRBV6-4A0A1B0GX49 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC14.38□□□□□ -0.11
TRBV6-4A0A1B0GX49 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
TRBV6-4A0A1B0GX49 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRBV6-4A0A1B0GX49 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
TRBV6-4A0A1B0GX49 PBX1-209ENST00000485769 834 ntTSL 2 BASIC14.38□□□□□ -0.11
TRBV6-4A0A1B0GX49 CASP6-205ENST00000505486 538 ntTSL 4 BASIC14.38□□□□□ -0.11
TRBV6-4A0A1B0GX49 AC137761.2-201ENST00000561729 223 ntBASIC14.38□□□□□ -0.11
TRBV6-4A0A1B0GX49 AC145350.3-201ENST00000569033 163 ntBASIC14.38□□□□□ -0.11
TRBV6-4A0A1B0GX49 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC14.38□□□□□ -0.11
TRBV6-4A0A1B0GX49 AC087623.3-201ENST00000607047 1098 ntBASIC14.38□□□□□ -0.11
TRBV6-4A0A1B0GX49 AC013268.1-206ENST00000638368 961 ntBASIC14.38□□□□□ -0.11
TRBV6-4A0A1B0GX49 AC112229.1-201ENST00000639295 961 ntBASIC14.38□□□□□ -0.11
TRBV6-4A0A1B0GX49 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRBV6-4A0A1B0GX49 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRBV6-4A0A1B0GX49 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
TRBV6-4A0A1B0GX49 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TRBV6-4A0A1B0GX49 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC14.38□□□□□ -0.11
TRBV6-4A0A1B0GX49 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
TRBV6-4A0A1B0GX49 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TRBV6-4A0A1B0GX49 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRBV6-4A0A1B0GX49 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
TRBV6-4A0A1B0GX49 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRBV6-4A0A1B0GX49 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC14.38□□□□□ -0.11
TRBV6-4A0A1B0GX49 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC14.38□□□□□ -0.11
TRBV6-4A0A1B0GX49 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms