Protein–RNA interactions for Protein: A0A0B4J1Z2

IGKV1D-43, Immunoglobulin kappa variable 1D-43, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV1D-43A0A0B4J1Z2 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
IGKV1D-43A0A0B4J1Z2 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
IGKV1D-43A0A0B4J1Z2 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
IGKV1D-43A0A0B4J1Z2 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
IGKV1D-43A0A0B4J1Z2 AL162377.1-201ENST00000618844 1793 ntBASIC18.07■□□□□ 0.48
IGKV1D-43A0A0B4J1Z2 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC18.07■□□□□ 0.48
IGKV1D-43A0A0B4J1Z2 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
IGKV1D-43A0A0B4J1Z2 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
IGKV1D-43A0A0B4J1Z2 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
IGKV1D-43A0A0B4J1Z2 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
IGKV1D-43A0A0B4J1Z2 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
IGKV1D-43A0A0B4J1Z2 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
IGKV1D-43A0A0B4J1Z2 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
IGKV1D-43A0A0B4J1Z2 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
IGKV1D-43A0A0B4J1Z2 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
IGKV1D-43A0A0B4J1Z2 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
IGKV1D-43A0A0B4J1Z2 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
IGKV1D-43A0A0B4J1Z2 AC092720.2-201ENST00000602388 1665 ntBASIC18.06■□□□□ 0.48
IGKV1D-43A0A0B4J1Z2 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
IGKV1D-43A0A0B4J1Z2 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
IGKV1D-43A0A0B4J1Z2 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
IGKV1D-43A0A0B4J1Z2 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
IGKV1D-43A0A0B4J1Z2 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
IGKV1D-43A0A0B4J1Z2 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
IGKV1D-43A0A0B4J1Z2 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
IGKV1D-43A0A0B4J1Z2 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC18.06■□□□□ 0.48
IGKV1D-43A0A0B4J1Z2 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
IGKV1D-43A0A0B4J1Z2 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC18.06■□□□□ 0.48
IGKV1D-43A0A0B4J1Z2 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC18.06■□□□□ 0.48
IGKV1D-43A0A0B4J1Z2 AC007322.4-201ENST00000509611 723 ntBASIC18.06■□□□□ 0.48
IGKV1D-43A0A0B4J1Z2 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC18.06■□□□□ 0.48
IGKV1D-43A0A0B4J1Z2 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC18.06■□□□□ 0.48
IGKV1D-43A0A0B4J1Z2 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
IGKV1D-43A0A0B4J1Z2 AL591742.1-201ENST00000604433 565 ntBASIC18.06■□□□□ 0.48
IGKV1D-43A0A0B4J1Z2 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
IGKV1D-43A0A0B4J1Z2 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC18.06■□□□□ 0.48
IGKV1D-43A0A0B4J1Z2 AC092437.1-201ENST00000624794 1048 ntBASIC18.06■□□□□ 0.48
IGKV1D-43A0A0B4J1Z2 AC013268.1-206ENST00000638368 961 ntBASIC18.06■□□□□ 0.48
IGKV1D-43A0A0B4J1Z2 AC112229.1-201ENST00000639295 961 ntBASIC18.06■□□□□ 0.48
IGKV1D-43A0A0B4J1Z2 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
IGKV1D-43A0A0B4J1Z2 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
IGKV1D-43A0A0B4J1Z2 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
IGKV1D-43A0A0B4J1Z2 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
IGKV1D-43A0A0B4J1Z2 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC18.06■□□□□ 0.48
IGKV1D-43A0A0B4J1Z2 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
IGKV1D-43A0A0B4J1Z2 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
IGKV1D-43A0A0B4J1Z2 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC18.06■□□□□ 0.48
IGKV1D-43A0A0B4J1Z2 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
IGKV1D-43A0A0B4J1Z2 AC112907.3-201ENST00000577781 2400 ntBASIC18.06■□□□□ 0.48
IGKV1D-43A0A0B4J1Z2 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.05■□□□□ 0.48
IGKV1D-43A0A0B4J1Z2 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.05■□□□□ 0.48
IGKV1D-43A0A0B4J1Z2 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC18.05■□□□□ 0.48
IGKV1D-43A0A0B4J1Z2 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC18.05■□□□□ 0.48
IGKV1D-43A0A0B4J1Z2 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
IGKV1D-43A0A0B4J1Z2 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
IGKV1D-43A0A0B4J1Z2 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
IGKV1D-43A0A0B4J1Z2 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
IGKV1D-43A0A0B4J1Z2 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
IGKV1D-43A0A0B4J1Z2 FAM21FP-204ENST00000608637 956 ntBASIC18.05■□□□□ 0.48
IGKV1D-43A0A0B4J1Z2 IKBKGP1-201ENST00000612193 1073 ntBASIC18.05■□□□□ 0.48
IGKV1D-43A0A0B4J1Z2 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
IGKV1D-43A0A0B4J1Z2 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
IGKV1D-43A0A0B4J1Z2 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
IGKV1D-43A0A0B4J1Z2 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.05■□□□□ 0.48
IGKV1D-43A0A0B4J1Z2 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.05■□□□□ 0.48
IGKV1D-43A0A0B4J1Z2 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
IGKV1D-43A0A0B4J1Z2 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
IGKV1D-43A0A0B4J1Z2 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.04■□□□□ 0.48
IGKV1D-43A0A0B4J1Z2 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
IGKV1D-43A0A0B4J1Z2 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
IGKV1D-43A0A0B4J1Z2 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC18.04■□□□□ 0.48
IGKV1D-43A0A0B4J1Z2 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
IGKV1D-43A0A0B4J1Z2 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
IGKV1D-43A0A0B4J1Z2 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
IGKV1D-43A0A0B4J1Z2 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC18.04■□□□□ 0.48
IGKV1D-43A0A0B4J1Z2 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC18.04■□□□□ 0.48
IGKV1D-43A0A0B4J1Z2 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC18.04■□□□□ 0.48
IGKV1D-43A0A0B4J1Z2 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
IGKV1D-43A0A0B4J1Z2 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
IGKV1D-43A0A0B4J1Z2 KRT8P36-201ENST00000489121 1440 ntBASIC18.04■□□□□ 0.48
IGKV1D-43A0A0B4J1Z2 AC068338.2-201ENST00000563278 1430 ntBASIC18.04■□□□□ 0.48
IGKV1D-43A0A0B4J1Z2 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
IGKV1D-43A0A0B4J1Z2 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.04■□□□□ 0.48
IGKV1D-43A0A0B4J1Z2 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC18.04■□□□□ 0.48
IGKV1D-43A0A0B4J1Z2 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
IGKV1D-43A0A0B4J1Z2 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
IGKV1D-43A0A0B4J1Z2 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.03■□□□□ 0.48
IGKV1D-43A0A0B4J1Z2 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC18.03■□□□□ 0.48
IGKV1D-43A0A0B4J1Z2 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
IGKV1D-43A0A0B4J1Z2 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
IGKV1D-43A0A0B4J1Z2 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC18.03■□□□□ 0.48
IGKV1D-43A0A0B4J1Z2 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
IGKV1D-43A0A0B4J1Z2 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
IGKV1D-43A0A0B4J1Z2 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
IGKV1D-43A0A0B4J1Z2 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
IGKV1D-43A0A0B4J1Z2 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.03■□□□□ 0.48
IGKV1D-43A0A0B4J1Z2 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
IGKV1D-43A0A0B4J1Z2 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.03■□□□□ 0.48
IGKV1D-43A0A0B4J1Z2 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
IGKV1D-43A0A0B4J1Z2 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms