Protein–RNA interactions for Protein: A0A0A6YYK1

TRAV8-1, T-cell receptor alpha variable 8-1 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-1A0A0A6YYK1 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC15.49■□□□□ 0.07
TRAV8-1A0A0A6YYK1 AIRN-201ENST00000601203 4374 ntBASIC15.49■□□□□ 0.07
TRAV8-1A0A0A6YYK1 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC15.49■□□□□ 0.07
TRAV8-1A0A0A6YYK1 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV8-1A0A0A6YYK1 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV8-1A0A0A6YYK1 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV8-1A0A0A6YYK1 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV8-1A0A0A6YYK1 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV8-1A0A0A6YYK1 STAC-204ENST00000457375 1366 ntTSL 2 BASIC15.49■□□□□ 0.07
TRAV8-1A0A0A6YYK1 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC15.48■□□□□ 0.07
TRAV8-1A0A0A6YYK1 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV8-1A0A0A6YYK1 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV8-1A0A0A6YYK1 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV8-1A0A0A6YYK1 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC15.48■□□□□ 0.07
TRAV8-1A0A0A6YYK1 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC15.48■□□□□ 0.07
TRAV8-1A0A0A6YYK1 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV8-1A0A0A6YYK1 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV8-1A0A0A6YYK1 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV8-1A0A0A6YYK1 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV8-1A0A0A6YYK1 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV8-1A0A0A6YYK1 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC15.48■□□□□ 0.07
TRAV8-1A0A0A6YYK1 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV8-1A0A0A6YYK1 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV8-1A0A0A6YYK1 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV8-1A0A0A6YYK1 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV8-1A0A0A6YYK1 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV8-1A0A0A6YYK1 AC116562.4-201ENST00000641316 2276 ntBASIC15.48■□□□□ 0.07
TRAV8-1A0A0A6YYK1 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV8-1A0A0A6YYK1 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC15.48■□□□□ 0.07
TRAV8-1A0A0A6YYK1 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV8-1A0A0A6YYK1 AC061975.6-201ENST00000579045 1553 ntBASIC15.48■□□□□ 0.07
TRAV8-1A0A0A6YYK1 MCC-208ENST00000514701 2855 ntTSL 2 BASIC15.48■□□□□ 0.07
TRAV8-1A0A0A6YYK1 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
TRAV8-1A0A0A6YYK1 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV8-1A0A0A6YYK1 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC15.48■□□□□ 0.07
TRAV8-1A0A0A6YYK1 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV8-1A0A0A6YYK1 AL020996.1-203ENST00000536896 2307 ntBASIC15.48■□□□□ 0.07
TRAV8-1A0A0A6YYK1 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC15.48■□□□□ 0.07
TRAV8-1A0A0A6YYK1 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV8-1A0A0A6YYK1 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC15.48■□□□□ 0.07
TRAV8-1A0A0A6YYK1 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV8-1A0A0A6YYK1 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
TRAV8-1A0A0A6YYK1 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
TRAV8-1A0A0A6YYK1 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
TRAV8-1A0A0A6YYK1 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV8-1A0A0A6YYK1 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC15.47■□□□□ 0.07
TRAV8-1A0A0A6YYK1 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV8-1A0A0A6YYK1 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV8-1A0A0A6YYK1 SMG8-203ENST00000578922 2178 ntBASIC15.47■□□□□ 0.07
TRAV8-1A0A0A6YYK1 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC15.47■□□□□ 0.07
TRAV8-1A0A0A6YYK1 AC105233.4-201ENST00000642045 216 ntBASIC15.47■□□□□ 0.07
TRAV8-1A0A0A6YYK1 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV8-1A0A0A6YYK1 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC15.47■□□□□ 0.07
TRAV8-1A0A0A6YYK1 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV8-1A0A0A6YYK1 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
TRAV8-1A0A0A6YYK1 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC15.47■□□□□ 0.07
TRAV8-1A0A0A6YYK1 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC15.47■□□□□ 0.07
TRAV8-1A0A0A6YYK1 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV8-1A0A0A6YYK1 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV8-1A0A0A6YYK1 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC15.46■□□□□ 0.07
TRAV8-1A0A0A6YYK1 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV8-1A0A0A6YYK1 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV8-1A0A0A6YYK1 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV8-1A0A0A6YYK1 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC15.46■□□□□ 0.07
TRAV8-1A0A0A6YYK1 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV8-1A0A0A6YYK1 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV8-1A0A0A6YYK1 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV8-1A0A0A6YYK1 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
TRAV8-1A0A0A6YYK1 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV8-1A0A0A6YYK1 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC15.46■□□□□ 0.07
TRAV8-1A0A0A6YYK1 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC15.46■□□□□ 0.07
TRAV8-1A0A0A6YYK1 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC15.46■□□□□ 0.07
TRAV8-1A0A0A6YYK1 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC15.46■□□□□ 0.07
TRAV8-1A0A0A6YYK1 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC15.46■□□□□ 0.07
TRAV8-1A0A0A6YYK1 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
TRAV8-1A0A0A6YYK1 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC15.46■□□□□ 0.07
TRAV8-1A0A0A6YYK1 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
TRAV8-1A0A0A6YYK1 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.06
TRAV8-1A0A0A6YYK1 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
TRAV8-1A0A0A6YYK1 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
TRAV8-1A0A0A6YYK1 AP004607.4-201ENST00000530158 1459 ntBASIC15.46■□□□□ 0.06
TRAV8-1A0A0A6YYK1 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.06
TRAV8-1A0A0A6YYK1 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV8-1A0A0A6YYK1 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
TRAV8-1A0A0A6YYK1 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV8-1A0A0A6YYK1 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV8-1A0A0A6YYK1 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV8-1A0A0A6YYK1 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV8-1A0A0A6YYK1 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC15.45■□□□□ 0.06
TRAV8-1A0A0A6YYK1 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV8-1A0A0A6YYK1 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV8-1A0A0A6YYK1 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV8-1A0A0A6YYK1 LHPP-203ENST00000392757 840 ntTSL 3 BASIC15.45■□□□□ 0.06
TRAV8-1A0A0A6YYK1 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV8-1A0A0A6YYK1 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV8-1A0A0A6YYK1 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC15.45■□□□□ 0.06
TRAV8-1A0A0A6YYK1 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV8-1A0A0A6YYK1 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
TRAV8-1A0A0A6YYK1 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
TRAV8-1A0A0A6YYK1 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms